Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0594 |
Symbol | |
ID | 6874438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 608741 |
End bp | 609433 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642783812 |
Product | chaperone protein FimC |
Protein accession | YP_002214499 |
Protein GI | 198242962 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.152719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAATA GTATAAAAGT AGGCTTTATT GTTCTTCTCA CGTTATTTAC TTCGCTGAAC GTACAGGCGG CGGGGGGGAT TGCATTAGGC GCCACGCGCG TTATTTATCC CTCGGCGGCG AAACAGACTT CTCTGGCAAT CAGTAATAGC GATACTCAAG AACGTTACCT CGTCAATTCA TGGATCGAAA ATAGCGCCGG GCAGAAAGAA AAAACGTTTA TCGTTACGCC GCCTTTATTC GTCAGCGAAC CCAAAAGCGA AAACACGCTG CGTATTATCT ACGCCGGGCA ACCGCTACCC GGGGATCGGG AGTCGTTATT CTGGATGAAC GTGAAAGCCA TCCCGTCGGT CGATAAAAGT CATATTGAAG GAAAAAACGT TCTGCAACTG GCGATTCTGT CGCGCATCAA ACTGTTCGTG CGTCCGGCGA ATTTGCCGCA GACGCCGGAA GACGCGCCGA CCTTGCTGAA ATTTTCCCGT GTCGGCAACC ATCTCAAGAT AACCAACCCA TCTGCTTATT ACCTCACGCT GGTCAATATC AGCGTGGGCG CGAAAAAGAT TGATAATGTG ATGATCGCGC CAAAAAGCGA CATGCAAATT CCCTTACCGA CAGGCGCGCA GGGCAGCGTG ACATTTCAGA CCGTCAATGA TTACGGCGCA TTGACGTCGG CGACAACGGC CAGTCTCGGT TAA
|
Protein sequence | MLNSIKVGFI VLLTLFTSLN VQAAGGIALG ATRVIYPSAA KQTSLAISNS DTQERYLVNS WIENSAGQKE KTFIVTPPLF VSEPKSENTL RIIYAGQPLP GDRESLFWMN VKAIPSVDKS HIEGKNVLQL AILSRIKLFV RPANLPQTPE DAPTLLKFSR VGNHLKITNP SAYYLTLVNI SVGAKKIDNV MIAPKSDMQI PLPTGAQGSV TFQTVNDYGA LTSATTASLG
|
| |