Gene SeD_A0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0582 
SymbolpurE 
ID6873874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp600534 
End bp601043 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID642783802 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_002214489 
Protein GI198246119 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.015045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.813353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC GCAATAATCC GGCGCGTGTC GCCATCGTGA TGGGGTCCAA AAGCGACTGG 
GCTACCATGC AATTCGCCGC CGAAATTTTT GAAATTCTGG ATGTCCCGCA CCATGTAGAA
GTGGTTTCCG CTCATCGCAC CCCCGATAAA CTGTTCAGCT TCGCCGAAAC GGCGGAAGAG
AACGGATATC AAGTGATTAT TGCCGGCGCG GGCGGCGCGG CGCACCTGCC GGGAATGATT
GCGGCAAAAA CGCTGGTCCC GGTACTCGGC GTGCCGGTAC AAAGCGCTGC GCTAAGCGGC
GTGGATAGCC TCTACTCCAT CGTGCAGATG CCGCGCGGCA TTCCGGTGGG TACGCTGGCG
ATCGGTAAAG CCGGTGCCGC TAACGCCGCC CTGCTCGCCG CGCAGATTCT GGCGCAACAC
GACGCGGAAC TGCATCAGCG CATTGCCGAC TGGCGCAAAG CGCAAACCGA TGAAGTTCTG
GAAAATCCCG ATCCGCGGGG GACGCTATGA
 
Protein sequence
MSSRNNPARV AIVMGSKSDW ATMQFAAEIF EILDVPHHVE VVSAHRTPDK LFSFAETAEE 
NGYQVIIAGA GGAAHLPGMI AAKTLVPVLG VPVQSAALSG VDSLYSIVQM PRGIPVGTLA
IGKAGAANAA LLAAQILAQH DAELHQRIAD WRKAQTDEVL ENPDPRGTL