Gene SeD_A0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0573 
Symbol 
ID6871410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp590132 
End bp591280 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content57% 
IMG OID642783793 
Productglycerate kinase II 
Protein accessionYP_002214480 
Protein GI198246050 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TAATTGCGCC AGATTCATTT AAAGAGAGCT TAAGCGCTGA TAAATGCTGT 
CAGGCTATTA AAGCGGGATT TTCAACCGTA TTTCCTGATG CGCGCTATGT TTGTTTACCG
ATCGCCGATG GCGGAGAAGG AACCGTGGAC GCAATGGTGG CTGCGACCGG CGGGAAACGG
GTTTCTGTGG ACGTTAGCGG GCCGATGGGG GAAAAAGTAA ACGGATTTTA TGGCCTGACC
GGCGACGGCA AAACGGCGAT TATTGAAATG GCGGCGGCGA GCGGATTGAT GCTGGTGGCG
CCAGAGGCGC GTAATCCGCT GCTGGCATCC AGTTTCGGCA CCGGCGAATT GATTCGTCAC
GCCCTGGACG CGGGGATTCG CCATATTATT CTGGGTATCG GCGGCAGCGC CACGGTGGAT
GGCGGAATGG GAGTAGCGCA GGCGCTCGGT GTGCGTTTTC TGGACGCGCA AGGAATGCTG
CTTGGCGCCG GAGGGGGCAA TTTATCGCGC CTGGCGAGCA TTGACCTGCA GGGGTGCGAT
CCGCGTATTT CAGAGTGTCG TATTGAGGTC GCCTGTGATG TTGATAACCC GTTGGTGGGG
CCACGCGGCG CGGCGGCGGT ATTCGGTCCG CAGAAAGGGG CGACGCCTGA AATGGTCGAG
ACGCTGGAAA ATGGATTACG TAATTATGCC CGTGTTTTAC ATGCCCTGAC CGGACGCGAC
ATGTCTCAAA TACCGGGCGG TGGAGCGGCC GGAGGAATGG GGATTGCTGC TATCGTCTTC
CTGGAAGCGG AAATGAAGCC CGGTATTGAG ATTGTTATGC AGGCGGTGAA GTTGGAGGAG
GCGGTAAAAG AGGCCTCGCT GGTGATTACC GGAGAAGGGC GAATCGACTC GCAAACGGCG
GGAGGAAAAG CGCCGATAGG CGTTGCGTCA GTGGCGAAAC GGCATCACGT CCCGGTTATC
GGCATTGCCG GCGTACTGGG CGACGGCGTG GAAGTGGTCC ATCGCCACGG TATTGATGCC
GTATTCAGTA TTTTGCCGCG GCTGGCGCCT TTGCCGGAGG TTCTGGCGAA CGGTGAACAA
AATCTCTACC ACAGCGCCTG TAATATTGCC CGCGTCATCA AACTTGGCCA GGATATCGGG
ACTCGTTAA
 
Protein sequence
MKIVIAPDSF KESLSADKCC QAIKAGFSTV FPDARYVCLP IADGGEGTVD AMVAATGGKR 
VSVDVSGPMG EKVNGFYGLT GDGKTAIIEM AAASGLMLVA PEARNPLLAS SFGTGELIRH
ALDAGIRHII LGIGGSATVD GGMGVAQALG VRFLDAQGML LGAGGGNLSR LASIDLQGCD
PRISECRIEV ACDVDNPLVG PRGAAAVFGP QKGATPEMVE TLENGLRNYA RVLHALTGRD
MSQIPGGGAA GGMGIAAIVF LEAEMKPGIE IVMQAVKLEE AVKEASLVIT GEGRIDSQTA
GGKAPIGVAS VAKRHHVPVI GIAGVLGDGV EVVHRHGIDA VFSILPRLAP LPEVLANGEQ
NLYHSACNIA RVIKLGQDIG TR