Gene SeD_A0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0569 
Symbol 
ID6872765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp584515 
End bp585762 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content46% 
IMG OID642783789 
Productmajor facilitator family transporter 
Protein accessionYP_002214476 
Protein GI198243148 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.676652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA CTAAAAAATC CGGGATTGAT TACTGGAAAC AAATTGTTGT CGTAATGAGC 
CTGGGCTGGG TAGCGATTTG GATCTATCGC ACCGTGCTTA CGCCAATTTA TCCAGAAATT
CAGGCATCTT TAGACAATGT AAGTAATGCA GAAATAGGCG CCATTGCAAG TTTTTACTTT
TTTGCTTACT GCAGTATGCA AATCCCTTGC GGAATATTGG TCGATAAATT CGGTCAAAAA
ATCATGCTGA TGGCCGGATT TACGCTTTTT ATTATTGGTA CACTCTGTAT CGCGAAAGCC
AATGGCCTGA CCATGATCTA TATAGGGTCG CTAATGGCAG GTGGCGGATG CGCTTCTTTC
TTTAGCTCGG CTTATTCACT CTCTTCGGCA AACGTGCCGC AGGCCCGTCG GGCATTAGCC
AACGCGATTA TCAACAGCGG GTCGGCTATA GGGATGGGGA TTGGCTTAAT CGGTTCCAGC
GTATTAGTAA AAAACATGAG CATGGCCTGG CAAAATGTAC TGTATATCGT GGCCGCGATA
TTAGTAATCA TGCTGTGCGT CTTTACGCTG ATCATTCGCG GTAAAGCCAA AAGCGACTCT
GCGCAAGCGG AAAAGCAAAC CCAAACCGTT ACGGAAGATG AGAAACGTGC GCCTTTATTC
TCTGGTTTAT TGTGTAGCGT TTACTTCCTC TATTTCTGTA CCTGCTACGG TTATTATTTG
ATAGTGACCT GGCTGCCCTC TTATCTACAG ACTGAAAGAG GATTTGATGG CGGAGCTATC
GGGCTGGCAT CAGCGCTGGT GGCGGTGGTT GGCGTACCGG GGGCGTTATT TTTTAGCCAT
CTGTCAGATA AATTCCGTAA CAGTAAAGTT AAGGTTATTC TCGGTCTGGA AATTGTGGCG
GCAGCAATGT TGGCGTTTAC GGTTTTGTCC CCGAATACCA CGATGCTGAT GGTCAGCCTG
ACGCTATACG GCTTGCTGGG GAAAATGGCG GTAGACCCGA TCCTGATCTC CTTTGTATCT
GAACAGGCTT CGGCAAAAAG TCTGGGAAGA GCTTTCAGCC TTTTTAATTT CTTTGGCATG
AGCTCGGCGG TTGTCGCCCC AACGTTGACC GGATTTATTT CGGATGTAAC GGGGTCGAAG
GAGATCAGTT TTGTGATTTC AGCATGTTTA GTGGTCACCG GAACGCTGAT CTTTGCTGTC
GTCACTTTAT ATAAAAAGAA AGCAACGCAA CGTATTGCTT CAGCTTAA
 
Protein sequence
MSETKKSGID YWKQIVVVMS LGWVAIWIYR TVLTPIYPEI QASLDNVSNA EIGAIASFYF 
FAYCSMQIPC GILVDKFGQK IMLMAGFTLF IIGTLCIAKA NGLTMIYIGS LMAGGGCASF
FSSAYSLSSA NVPQARRALA NAIINSGSAI GMGIGLIGSS VLVKNMSMAW QNVLYIVAAI
LVIMLCVFTL IIRGKAKSDS AQAEKQTQTV TEDEKRAPLF SGLLCSVYFL YFCTCYGYYL
IVTWLPSYLQ TERGFDGGAI GLASALVAVV GVPGALFFSH LSDKFRNSKV KVILGLEIVA
AAMLAFTVLS PNTTMLMVSL TLYGLLGKMA VDPILISFVS EQASAKSLGR AFSLFNFFGM
SSAVVAPTLT GFISDVTGSK EISFVISACL VVTGTLIFAV VTLYKKKATQ RIASA