Gene SeD_A0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0567 
Symbolhyi 
ID6875253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp582694 
End bp583470 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content45% 
IMG OID642783787 
Producthydroxypyruvate isomerase 
Protein accessionYP_002214474 
Protein GI198244905 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID[TIGR03234] hydroxypyruvate isomerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTT TCTCTGCCAA TCTTTCTATG CTGTTTACGG AATATGATTT CCTGGAACGC 
TTTGATAAAG CGGCGTTGTC GGGATTTCGC GGCGTGGAAT TCATGTTTCC CTACGATAAC
GACATCGAAG TGTTAAAACG TAAGCTCAGG GATAATAATC TGGAACATAC GTTACATAAT
TTACCTGCTG GCGACTGGGC GGCTGGCGAA CGTGGAATTG CCTGTATTCC TGGGCGCGAA
GAAGAGTTTC GCGATGGCGT AGCGGCCGCA ATCCGCTATG CACGTGCGTT AGGCAATAAG
AAAATAAATT GTCTGGTGGG TAAAACGCCG TCAGGATTCT CCGCAACGGA GATCCACGAC
ACGTTGGTCG AAAACCTGCG CTATGCGGCA AATATGCTGG CGAAAGAAGA CATTTTATTA
CTTATCGAAC CTATTAATCA CTTTGATATG CCGGGATTCC ATCTCACCGG CACTCAACAG
GCGTTAGCAT TAATTAAGGA TATCGGCAGT GATAATATCA AAATTCAGTA TGATATTTAT
CACATGCAAC GCATGGAAGG GGAATTAACG CAAACCATGA CGGCATGGGC CGATAAAATA
GGCCATTTAC AGATTGCTGA TAACCCGCGT CGCGGCGAGC CGGGGACCGG GGAAATTAAT
TATGACTTTA TTTTTAATGT CATTAAACAG TCTGGTTATG ATGGCTGGGT TGGCTGTGAA
TATAAACCAC TGACTACCAC GGAAGCGGGA TTATCGTGGA TTAATCAGTA CCGTTAA
 
Protein sequence
MLRFSANLSM LFTEYDFLER FDKAALSGFR GVEFMFPYDN DIEVLKRKLR DNNLEHTLHN 
LPAGDWAAGE RGIACIPGRE EEFRDGVAAA IRYARALGNK KINCLVGKTP SGFSATEIHD
TLVENLRYAA NMLAKEDILL LIEPINHFDM PGFHLTGTQQ ALALIKDIGS DNIKIQYDIY
HMQRMEGELT QTMTAWADKI GHLQIADNPR RGEPGTGEIN YDFIFNVIKQ SGYDGWVGCE
YKPLTTTEAG LSWINQYR