| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0566 |
|---|
| Symbol | gcl |
|---|
| ID | 6875121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 580900 |
|---|
| End bp | 582681 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642783786 |
|---|
| Product | glyoxylate carboligase |
|---|
| Protein accession | YP_002214473 |
|---|
| Protein GI | 198245781 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3960] Glyoxylate carboligase |
|---|
| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA TGAGAGCCGT GGATGCGGCA ATGTATGTGC TGGAAAAAGA AGGTATCACC
ACAGCATTCG GCGTTCCTGG GGCTGCAATC AACCCCTTCT ATTCTGCAAT ACGTAAGCAT
GGAGGCATTC GCCATATACT GGCGCGTCAT GTGGAAGGCG CTTCACATAT GGCTGAGGGC
TACACACGTG CGGCGGCAGG TAATATTGGG GTTTGCCTGG GCACTTCCGG CCCGGCGGGA
ACCGACATGA TCACCGCGCT CTATTCCGCT TCTGCCGACT CTATCCCGAT TTTATGCATT
ACTGGTCAGG CGCCACGAGC GCGTCTGCAC AAGGAAGATT TCCAGGCAGT CGATATTGAA
GCGATTGCAA AACCAGTCAG CAAGATGGCA GTGACGGTTC GTGAGGCGGC GCTGGTGCCG
CGCGTATTAC AGCAGGCTTT TCATCTGATG CGCTCAGGCC GCCCAGGTCC TGTGCTGGTT
GATTTACCGT TTGATGTCCA GGTTGCGGAA ATCGAATTCG ATCCGGATAT GTATGAGCCG
CTGCCGGTAT ATAAGCCAGC CGCCAGCCGC GTACAGATTG AAAAGGCGCT GGAGATGCTG
ATTCAGTCCG AGCGTCCGGT AATTGTCGCG GGCGGCGGGG TTATTAACGC CGACGCCGCG
CCACTGCTGC AGCAGTTTGC CGAACTGACC AATGTACCGG TGATCCCTAC CCTGATGGGC
TGGGGCTGTA TCCCGGACGA TCACCCCCTA ATGGCGGGGA TGGTCGGCCT GCAAACGGCG
CACCGCTACG GCAACGCCAC TCTGCTGGCA TCCGATATGG TTTTTGGCAT CGGTAACCGT
TTCGCCAACC GTCATACGGG GTCCGTTGAG AAATATACTC AGGGGCGAAA AATCATCCAT
ATCGATATTG AACCGACGCA AATTGGCCGC GTGTTGTGCC CGGATCTGGG CATCGTTTCG
GACGCCAAAG CGGCGCTAAC GTTGCTGATC GATGTCGCGC AGGAGATGCA AAAGGCGGGG
CGTTTGCCAT GCCGGAAGAC CTGGGTGGAC GAATGCCAGC AGCGTAAACG GACTTTGCTG
CGTAAAACCC ACTTTGACAA CGTGCCAGTG AAGCCGCAGC GCGTCTATGA AGAGATGAAC
AAAGCCTTTG GTCGCGATGT GTGCTATGTC ACCACCATTG GATTGTCGCA AATCGCGGCA
GCGCAGATGC TGCATGTGTT TAAAGACAGA CACTGGATCA ACTGCGGCCA GGCGGGGCCT
CTTGGCTGGA CAATCCCGGC GGCATTAGGG GTTTGTGCTG CCGATCCGCA ACGCAATGTG
GTGGCGATTT CCGGCGATTT CGACTTCCAG TTCCTGATTG AAGAGTTAGC CGTCGGCGCG
CAGTTTAACA TCCCGTATAT CCATGTGCTG GTTAACAACG CTTATCTTGG TCTGATTCGC
CAGTCGCAAC GCGCATTTGA CATGGACTAC TGCGTACAGC TCGCCTTTGA AAATATCAAC
TCCAGCGAAG TGAATGGCTA TGGCGTTGAC CATGTAAAAG TGGCAGAAGG GTTAGGCTGT
AAAGCAATTC GTGTCTTTAA ACCGGAAGAT ATTGCGCCTG CATTTGAACA AGCTAAAGCG
CTGATGGCGC AATATCGCGT TCCGGTGGTG GTGGAAGTCA TTCTGGAACG CGTAACCAAT
ATTTCCATGG GCAGCGAACT GGATAACGTA ACCGAGTTTG AAGAGGTTGC GGATAGTGCG
AAAGATGCGC CAACAGAAAC CTGTTTTATG AAATATGAGT AA
|
|---|
| Protein sequence | MAKMRAVDAA MYVLEKEGIT TAFGVPGAAI NPFYSAIRKH GGIRHILARH VEGASHMAEG
YTRAAAGNIG VCLGTSGPAG TDMITALYSA SADSIPILCI TGQAPRARLH KEDFQAVDIE
AIAKPVSKMA VTVREAALVP RVLQQAFHLM RSGRPGPVLV DLPFDVQVAE IEFDPDMYEP
LPVYKPAASR VQIEKALEML IQSERPVIVA GGGVINADAA PLLQQFAELT NVPVIPTLMG
WGCIPDDHPL MAGMVGLQTA HRYGNATLLA SDMVFGIGNR FANRHTGSVE KYTQGRKIIH
IDIEPTQIGR VLCPDLGIVS DAKAALTLLI DVAQEMQKAG RLPCRKTWVD ECQQRKRTLL
RKTHFDNVPV KPQRVYEEMN KAFGRDVCYV TTIGLSQIAA AQMLHVFKDR HWINCGQAGP
LGWTIPAALG VCAADPQRNV VAISGDFDFQ FLIEELAVGA QFNIPYIHVL VNNAYLGLIR
QSQRAFDMDY CVQLAFENIN SSEVNGYGVD HVKVAEGLGC KAIRVFKPED IAPAFEQAKA
LMAQYRVPVV VEVILERVTN ISMGSELDNV TEFEEVADSA KDAPTETCFM KYE
|
|---|
| |