Gene SeD_A0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0563 
Symbol 
ID6872449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp578283 
End bp579209 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content53% 
IMG OID642783783 
ProductDNA-binding transcriptional activator AllS 
Protein accessionYP_002214470 
Protein GI198241753 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACC CGGAAACACT GCGTACCTTT ATCAGCGTTG CCGAAACGGG GAGTTTCTCC 
AAAGCGGCGG AGCGCCTGTG TAAAACCACG GCAACCATTA GCTACCGCAT CAAACTGTTG
GAGGAAAATA CCGGCGTAGG GCTGTTCTTT CGCACAACGC GAAGCGTCTC GTTGACGGCG
GCGGGCTCTC ACCTTCTCTC TCAGGCAAAA GACTGGCTTG CGTGGCTGGA CAGCATGCCT
GACGAGCTAC GCCAGGTTAA CGACGGCGTA GAGCGTCAGG TCAATATTGT GGTGAATAAC
CTGCTCTATA GCCCGCAAGC GGTCGCCAGT CTCTTATCGT GGCTTAATGC GCGTTACCCT
TTCACTCAGT TTCACTTTTC CCGGCAAATT TATATGGGCG TCTGGGATTC GCTCCTGTAT
GAAGGTTTTT CGCTGGCGAT TGGCGTAACT GGCACCGAGC CGTTGGCTAA TACCTTTATG
CTCGACCCTT TAGGTTCCGT ACAATGGCGT TTTGTGATGT CTGCGGATCA TCCTTTAGCT
CACGTCAGCG GGCCTCTAAC AGAAGCGCAG TTGCGCCGTT TCCCGGCAAT TAATATCGAA
GACAGCGCAC GTACGCTGAC CAAGCGGGTA GCCTGGCGCC TTCCGGGGCA GAAGGAAATT
ATCGTGCCTG ATATGGAAAC CAAAATCGCC GCTCATCTGG CAGGCGTCGG TATCGGTTTT
GTCCCGCAGC CGCTTTGTCA AACGCTGATC GACAAAAACG AACTGGTAAG CTGTACCATC
CCTACGATGC GTCCGCCCTC ACCGTTAAGC CTCGCCTGGC ATAAATTTGG CGGAGGCAAA
GCGGTAGAAG ACATTGTGAA ATTATTTACC CAACGGCAAC CCGAAATAGC CGGTTTTTTA
TCCATTTTCA ATACCGTACG CTGTTAA
 
Protein sequence
MFDPETLRTF ISVAETGSFS KAAERLCKTT ATISYRIKLL EENTGVGLFF RTTRSVSLTA 
AGSHLLSQAK DWLAWLDSMP DELRQVNDGV ERQVNIVVNN LLYSPQAVAS LLSWLNARYP
FTQFHFSRQI YMGVWDSLLY EGFSLAIGVT GTEPLANTFM LDPLGSVQWR FVMSADHPLA
HVSGPLTEAQ LRRFPAINIE DSARTLTKRV AWRLPGQKEI IVPDMETKIA AHLAGVGIGF
VPQPLCQTLI DKNELVSCTI PTMRPPSPLS LAWHKFGGGK AVEDIVKLFT QRQPEIAGFL
SIFNTVRC