Gene SeD_A0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0555 
Symbol 
ID6875531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp569872 
End bp570558 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content59% 
IMG OID642783776 
Productputative ABC transporter ATP-binding protein YbbA 
Protein accessionYP_002214463 
Protein GI198244920 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGG AAAACAGTGT TGAAGTTCAT CGTCTCAGGA AGTCCGTCGG TCAGGGTGAG 
CATGAGCTTT CCATCCTTAC CGGAGTTGAA CTGGTTGTCA AACGCGGCGA AACCATTGCG
CTGATTGGCG AATCAGGATC GGGAAAATCT ACGCTGCTGG CGATTCTCGC TGGACTGGAT
GACGGCAGTA GCGGAGAGGT CAGTCTGGTC GGGAAACTGC TTCACCAGAT GGACGAAGAG
GCGCGGGCGC AGCTTCGCGC TCAGCATGTC GGTTTTGTTT TTCAATCCTT CATGCTTATT
CCTACGCTTA ACGCGCTGGA AAACGTTGAG CTACCGGCCC TGCTACGCGG TGAAAACAGC
GGTCAGAGTA AGGCGGGGGC GAAAGCGCTG CTCGAACAAC TGGGACTGGG AAAACGGCTT
GACCACCTTC CGGCACAGCT TTCCGGCGGC GAACAGCAGC GCGTAGCGCT GGCGCGCGCG
TTTAACGGGC GTCCTGATGT GCTGTTTGCC GATGAGCCGA CGGGCAACCT TGACCGTCAG
ACCGGAGATA AAATCGCCGA CCTGCTATTT TCGCTTAACC GCGAGCACGG CACCACGCTG
ATTCTGGTGA CGCACGACCC GGCGCTGGCG GCGCGCTGCG ACCGGCGGCT GCGGTTGGTC
AACGGTCAGT TACAGGAGGA GGTATGA
 
Protein sequence
MPAENSVEVH RLRKSVGQGE HELSILTGVE LVVKRGETIA LIGESGSGKS TLLAILAGLD 
DGSSGEVSLV GKLLHQMDEE ARAQLRAQHV GFVFQSFMLI PTLNALENVE LPALLRGENS
GQSKAGAKAL LEQLGLGKRL DHLPAQLSGG EQQRVALARA FNGRPDVLFA DEPTGNLDRQ
TGDKIADLLF SLNREHGTTL ILVTHDPALA ARCDRRLRLV NGQLQEEV