Gene SeD_A0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0553 
Symbol 
ID6871019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp567448 
End bp568329 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID642783773 
Productthioredoxin domain-containing protein 
Protein accessionYP_002214460 
Protein GI198242491 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAGA CAAAAGAGAG CGACGCCATG TCCGTACAGA ACATTGTCAA TATTAATGAA 
TCCAACCTGC AGCAGACCTT AGAGCAGTCC ATGACCACGC CGGTACTGTT CTATTTCTGG
TCTGAACGCA GCCAACACTG TCTGCAATTA ACGCCAGTGC TGGAAAGTCT GGCTGCCCAG
TACCACGGTC AGTTTATTCT GGCAAAGCTG GACTGCGACG CCGAACAGAT GATCGCCGCT
CAGTTTGGGC TGCGCGCCAT CCCGACAGTC TATCTGTTCC AGAATGGCCA ACCGGTCGAT
GGTTTCCAGG GGCCGCAGCC GGAAGAGGCG ATCCGCGCTC TGCTGGATAA AGTACTGCCG
CGTGAAGAAG AGCTAAAAGC GCAACAAGCG ATGCAGTTAA TGCAGGAGGG CAACTACATT
GACGCGCTGC CGTTGCTCAA AGACGCCTGG CAGCTCTCTT CGCAGAACAG TGAGATTGGC
CTGTTACTGG CGGAAGCGCA AATTGCTCTA AACCGCTCTG AAGAGGCCGA AGCGGTATTA
AAAACTATAC CGCTACAGGA TCAGGATACC CGTTACCAGG GGCTGGTTGC GCAGATCGAA
CTGCTTAAAC AGGCGGCGGA TACGCCGGAA ATTCAGCAAC TTCAGCAGCA AGTCGCGGAG
AATCCGCAGG ATGCGGCTTT GGCAACGCAA CTGGCGTTGC AGTTGCACCA GGTCGGACGT
AATGAAGAAG CGCTGGAATT GCTGTTCAGC CATCTGAGAA AAGATCTTGC CGCCGCCGAG
GGACAGACGC GCAAAACCTT CCAGGAGATC CTTGCCGCGC TCGGCACCGG CGACGCGCTG
GCGTCGAAAT ACCGCCGCCA GTTGTACGCG CTACTGTATT AA
 
Protein sequence
MTQTKESDAM SVQNIVNINE SNLQQTLEQS MTTPVLFYFW SERSQHCLQL TPVLESLAAQ 
YHGQFILAKL DCDAEQMIAA QFGLRAIPTV YLFQNGQPVD GFQGPQPEEA IRALLDKVLP
REEELKAQQA MQLMQEGNYI DALPLLKDAW QLSSQNSEIG LLLAEAQIAL NRSEEAEAVL
KTIPLQDQDT RYQGLVAQIE LLKQAADTPE IQQLQQQVAE NPQDAALATQ LALQLHQVGR
NEEALELLFS HLRKDLAAAE GQTRKTFQEI LAALGTGDAL ASKYRRQLYA LLY