Gene SeD_A0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0551 
Symbol 
ID6872597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp565919 
End bp566596 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID642783771 
Productputative ABC transporter ATP-binding protein YbbL 
Protein accessionYP_002214458 
Protein GI198243437 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.522757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC GTAGCATGTT GCTTGAGTTA AAGCAGGTCG GTTACCGGAC TGCGACGACA 
AAAATAGTGA ATAACATCAG TTTTACGCTG CAACGCGGCG AATTTAAGTT AATTACCGGT
CCTTCTGGCT GCGGAAAAAG TACGTTGTTG AAAATGGTGG CCTCGTTAAT AAGCCCTGAT
ATCGGCGTGA TTCTTTTTGA GGGGCAGGAT ATTACTACTC TGAGTCCGGA AGCCTATCGC
CAGCAGGTTT CTTATTGCGC TCAGACGCCA GCGCTATTTG GCGATACGGT TTACGATAAC
CTGATTTTTC CCTGGCAAAT TCGCCATCAG CGCCCGCAGC CGACAGCCTT CGCAGACGAT
CTGGCGCGTT TTGAACTGCC GGAGACGATT CTGCAAAAAC CGATTACCGC GCTTTCCGGC
GGAGAAAAAC AGCGTATTGC TCTAATTCGT AATCTACAGT TTCTGCCGAA AATACTGTTA
CTCGACGAAA TAACCAGCGC GCTGGATGAA CATAACAAAC AGAATGTGAA TGATATTATT
CATCGCTATG TTCGCGATAA GCAGGTCGCT GTCTTGTGGG TAACGCATGA TAAAGATGAA
ATTCAACACG CGGATAAGGT GATAACGTTA ACGCCATCTG CCGGAGAGAT GCAGGAGACG
CGTTATGAAC GAGCATAA
 
Protein sequence
MTERSMLLEL KQVGYRTATT KIVNNISFTL QRGEFKLITG PSGCGKSTLL KMVASLISPD 
IGVILFEGQD ITTLSPEAYR QQVSYCAQTP ALFGDTVYDN LIFPWQIRHQ RPQPTAFADD
LARFELPETI LQKPITALSG GEKQRIALIR NLQFLPKILL LDEITSALDE HNKQNVNDII
HRYVRDKQVA VLWVTHDKDE IQHADKVITL TPSAGEMQET RYERA