Gene SeD_A0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0550 
Symbol 
ID6873102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp564855 
End bp565772 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content55% 
IMG OID642783770 
Productband 7 protein 
Protein accessionYP_002214457 
Protein GI198243283 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.531066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTC TTATCCCTAT TCTCATTTTC GTCGCGCTGG TGATCGTCGG CGCGGGCGTC 
AAAATCGTTC CGCAGGGATA CCAGTGGACG GTGGAGCGCT TTGGACGTTA CACCAAAACC
CTGCAGCCGG GATTAAGCCT TGTTGTACCG TTTATGGACA GAATTGGCCG CAAGATCAAT
ATGATGGAGC AGGTGCTGGA TATTCCGTCG CAGGAGGTGA TCTCAAAAGA TAACGCCAAC
GTCACTATCG ATGCGGTCTG TTTTATTCAG GTTATCGATG CGCCGCGCGC CGCTTATGAA
GTCAGTAACC TGGAACTGGC GATCATTAAC CTGACCATGA CCAATATCCG TACGGTGCTC
GGTTCGATGG AGCTGGATGA AATGCTCTCC CAGCGCGACA GCATCAACAC GCGGCTGCTA
CATATTGTCG ATGAAGCCAC CAACCCGTGG GGAATTAAAG TTACCCGTAT CGAAATTCGC
GATGTCCGCC CGCCCGCGGA ATTGATCTCC TCGATGAACG CCCAGATGAA AGCGGAACGT
ACCAAACGCG CCTATATCCT TGAGGCCGAA GGGGTACGTC AGGCGGAAAT CCTGAAAGCC
GAGGGGGAAA AACAGTCGCA GATTCTGAAA GCCGAAGGCG AACGTCAGTC CGCTTTCCTG
CAGGCGGAAG CGCGCGAACG TTCCGCCGAA GCGGAAGCCC GCGCTACGCA GATGGTATCT
GAAGCCATCG CCGCCGGGGA TATTCAGGCG ATAAACTACT TCGTGGCGCA GAAATACACC
GAAGCGTTAC AGCAAATCGG CTCGGCGAAT AACAGCAAAG TGGTCATGAT GCCGCTGGAT
GCCAGCAGTC TGATGGGCGC TATCGCCGGG ATCAGCGAGC TGGTTAAGGA CAGCGCCAGC
GAACGGAAAA AAGCATGA
 
Protein sequence
MLILIPILIF VALVIVGAGV KIVPQGYQWT VERFGRYTKT LQPGLSLVVP FMDRIGRKIN 
MMEQVLDIPS QEVISKDNAN VTIDAVCFIQ VIDAPRAAYE VSNLELAIIN LTMTNIRTVL
GSMELDEMLS QRDSINTRLL HIVDEATNPW GIKVTRIEIR DVRPPAELIS SMNAQMKAER
TKRAYILEAE GVRQAEILKA EGEKQSQILK AEGERQSAFL QAEARERSAE AEARATQMVS
EAIAAGDIQA INYFVAQKYT EALQQIGSAN NSKVVMMPLD ASSLMGAIAG ISELVKDSAS
ERKKA