Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0550 |
Symbol | |
ID | 6873102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 564855 |
End bp | 565772 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642783770 |
Product | band 7 protein |
Protein accession | YP_002214457 |
Protein GI | 198243283 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.531066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCATTC TTATCCCTAT TCTCATTTTC GTCGCGCTGG TGATCGTCGG CGCGGGCGTC AAAATCGTTC CGCAGGGATA CCAGTGGACG GTGGAGCGCT TTGGACGTTA CACCAAAACC CTGCAGCCGG GATTAAGCCT TGTTGTACCG TTTATGGACA GAATTGGCCG CAAGATCAAT ATGATGGAGC AGGTGCTGGA TATTCCGTCG CAGGAGGTGA TCTCAAAAGA TAACGCCAAC GTCACTATCG ATGCGGTCTG TTTTATTCAG GTTATCGATG CGCCGCGCGC CGCTTATGAA GTCAGTAACC TGGAACTGGC GATCATTAAC CTGACCATGA CCAATATCCG TACGGTGCTC GGTTCGATGG AGCTGGATGA AATGCTCTCC CAGCGCGACA GCATCAACAC GCGGCTGCTA CATATTGTCG ATGAAGCCAC CAACCCGTGG GGAATTAAAG TTACCCGTAT CGAAATTCGC GATGTCCGCC CGCCCGCGGA ATTGATCTCC TCGATGAACG CCCAGATGAA AGCGGAACGT ACCAAACGCG CCTATATCCT TGAGGCCGAA GGGGTACGTC AGGCGGAAAT CCTGAAAGCC GAGGGGGAAA AACAGTCGCA GATTCTGAAA GCCGAAGGCG AACGTCAGTC CGCTTTCCTG CAGGCGGAAG CGCGCGAACG TTCCGCCGAA GCGGAAGCCC GCGCTACGCA GATGGTATCT GAAGCCATCG CCGCCGGGGA TATTCAGGCG ATAAACTACT TCGTGGCGCA GAAATACACC GAAGCGTTAC AGCAAATCGG CTCGGCGAAT AACAGCAAAG TGGTCATGAT GCCGCTGGAT GCCAGCAGTC TGATGGGCGC TATCGCCGGG ATCAGCGAGC TGGTTAAGGA CAGCGCCAGC GAACGGAAAA AAGCATGA
|
Protein sequence | MLILIPILIF VALVIVGAGV KIVPQGYQWT VERFGRYTKT LQPGLSLVVP FMDRIGRKIN MMEQVLDIPS QEVISKDNAN VTIDAVCFIQ VIDAPRAAYE VSNLELAIIN LTMTNIRTVL GSMELDEMLS QRDSINTRLL HIVDEATNPW GIKVTRIEIR DVRPPAELIS SMNAQMKAER TKRAYILEAE GVRQAEILKA EGEKQSQILK AEGERQSAFL QAEARERSAE AEARATQMVS EAIAAGDIQA INYFVAQKYT EALQQIGSAN NSKVVMMPLD ASSLMGAIAG ISELVKDSAS ERKKA
|
| |