Gene SeD_A0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0547 
SymbolcopA 
ID6873861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp561378 
End bp563879 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content59% 
IMG OID642783767 
Productcopper exporting ATPase 
Protein accessionYP_002214454 
Protein GI198242788 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAA CTATCGACCT GACCCTGGAC GGTTTGTCCT GCGGTCATTG CGTTAAACGC 
GTGAAAGAAT GTCTTGAACA ACGTCCGGAT GTTGAGCTGG CGGACGTTAC CGTAACCGAA
GCGCACGTTA CCGGTACGGC CAGTGCGGAC GCGTTAATTG AAACCATCAA ACAAGCCGGG
TATGGCGCGA CGTTAAGCCA CCCAAAGGCT AAACCGCTGA CGGAGTCATC AATCCCGTCG
GAAGCACTGG CAGCGGTTCC TCATGAGCTT CCGGTAGCGA CGGCCGATGA AGAAAGCCAA
CAGTTGCTGT TAAGCGGCAT GAGCTGCGCC AGTTGTGTCA CCCGCGTACA ACATGCGCTA
CAAAGCGTAC CGGGCGTCAC GCAGGCACGG GTAAACCTGG CGGAACGCAC TGCGCTGGTG
ATGGGCAGCG CGTCCGCCGC TGATTTAGTG CAGGCGGTGG AAAAAGCCGG CTACGGCGCA
GAGGCGATTG AAGATGACAT CAAACGCCGC GAGCGCCAGC AGGAAACCGC CATCGCCACC
ATGAAACGTT TTCGCTGGCA GGCCATCGTC GCCCTGGCGG TCGGTATACC GGTCATGGTC
TGGGGGATGA TCGGCGATAA CATGATGGTG ACCGGCGACA ACCGCAGCCT GTGGCTGGCT
ATTGGCCTGA TCACGCTTGC GGTGATGGTC TTTGCGGGCG GTCACTTTTA CCGTAACGCG
TGGAAAAGCC TGCTGAACGG CACGGCGACG ATGGATACGC TGGTGGCGCT CGGCACCGGG
GTCGCCTGGC TCTACTCCAT GAGCGTCAAC CTGTGGCCGC AGTGGTTCCC GATGGAAGCA
CGGCACCTCT ATTACGAAGC CAGCGCGATG ATTATCGGTC TGATTAATCT CGGACACATG
CTGGAAGCGC GCGCCCGTCA GCGTTCCTCA AAAGCGCTGG AAAAATTACT CGATCTCACC
CCGCCCACCG CACGCGTCGT GACAGAAGAC GGCGAAAAAA GCGTCCCGCT GGCGGACGTT
CAGCCAGGGA TGCTACTGCG ACTCACTACC GGCGATCGCG TGCCGGTGGA TGGCGAAATT
ACCCAGGGCG AAGCGTGGCT TGATGAAGCC ATGCTGACCG GCGAACCTAT TCCGCAGCAA
AAAGGCGAAG GCGACAGCGT TCATGCCGGC ACCGTCGTCC AGGACGGCAG CGTCCTGTTC
CGCGCCAGCG CGGTGGGCAG CCATACCACG CTGTCACGCA TTATTCGCAT GGTACGCCAG
GCGCAAAGCA GTAAACCGGA AATTGGCCAA CTGGCCGATA AAATCTCCGC GGTATTCGTT
CCCGTCGTCG TGGCCATTGC GCTGTTCAGC GCCGCTATCT GGTATTTCTT CGGGCCGGCG
CCGCAAATTG TTTATACGCT GGTCATCGCC ACCACCGTAC TGATTATCGC CTGCCCTTGC
GCATTAGGCC TGGCGACGCC AATGTCGATT ATTTCCGGCG TAGGCCGCGC TGCCGAATTC
GGCGTGCTGG TACGCGACGC CGATGCCCTG CAACGCGCCA GTACGTTGGA TACCCTCGTT
TTTGATAAAA CCGGGACGCT GACGGAAGGC AAGCCGCAAG TGGTGGCGAT AAAAACCTTT
AACGGCGTTG AGGAAGCTCA GGCATTACGT CTGGCTGCCG CGCTCGAACA AGGCTCCAGC
CACCCGCTGG CCCATGCGAT TCTGGAAAAA GCCGGCGATG ATAAACTGCC GCAGGTGAAC
GGTTTCAGAA CGCTGCGCGG ACTGGGCGTC AGCGGTGAAG CGGAAGGTCA TCAACTGCTT
CTGGGGAACC AGGCGTTGCT GAACGAACAG CACGTCGCCA CGGATGATAT GACGGCGGAA
ATCACCGCGC AGGCCTCGCA AGGCTCGACT CCGGTCCTGC TGGCGATTGA CGGTAAAGCG
GCGGCGTTAC TGGCGGTACG CGATCCATTG CGCAGCGATA GTATTGCCGC GCTTGAACGC
CTGCACAACG CCGGATACCG TCTGGTAATG CTCACCGGGG ATAACCCAAC GACGGCTAAC
GCGATTGCCA AAGAAGCGGG CATTGATGAA GTGATTGCGG GCGTTCTGCC GGATGGCAAA
GCCGATGCGA TTAAACGTCT GCAAAGCCAG GGTCGTCAGG TTGCGATGGT CGGCGATGGT
ATCAACGATG CGCCCGCGCT GGCGCAGGCG GACGTCGGTA TCGCGATGGG CGGCGGCAGT
GATGTGGCGA TTGAAACCGC GGCGATTACG CTGATGCGCC ATAGTCTGAT GGGCGTGGCG
GATGCGCTGG CCATTTCGCG CGCGACGTTG CGCAATATGA AGCAAAACCT GCTTGGCGCA
TTTATCTACA ACAGCATTGG TATCCCGGTG GCCGCCGGTA TTCTGTGGCC GTTTACCGGT
ACCTTGTTAA ACCCGGTAGT AGCAGGCGCG GCAATGGCGC TGTCTTCCAT TACCGTCGTC
AGCAATGCCA ACCGGCTATT GCGTTTTAAA CCGAAAGCGT AA
 
Protein sequence
MSQTIDLTLD GLSCGHCVKR VKECLEQRPD VELADVTVTE AHVTGTASAD ALIETIKQAG 
YGATLSHPKA KPLTESSIPS EALAAVPHEL PVATADEESQ QLLLSGMSCA SCVTRVQHAL
QSVPGVTQAR VNLAERTALV MGSASAADLV QAVEKAGYGA EAIEDDIKRR ERQQETAIAT
MKRFRWQAIV ALAVGIPVMV WGMIGDNMMV TGDNRSLWLA IGLITLAVMV FAGGHFYRNA
WKSLLNGTAT MDTLVALGTG VAWLYSMSVN LWPQWFPMEA RHLYYEASAM IIGLINLGHM
LEARARQRSS KALEKLLDLT PPTARVVTED GEKSVPLADV QPGMLLRLTT GDRVPVDGEI
TQGEAWLDEA MLTGEPIPQQ KGEGDSVHAG TVVQDGSVLF RASAVGSHTT LSRIIRMVRQ
AQSSKPEIGQ LADKISAVFV PVVVAIALFS AAIWYFFGPA PQIVYTLVIA TTVLIIACPC
ALGLATPMSI ISGVGRAAEF GVLVRDADAL QRASTLDTLV FDKTGTLTEG KPQVVAIKTF
NGVEEAQALR LAAALEQGSS HPLAHAILEK AGDDKLPQVN GFRTLRGLGV SGEAEGHQLL
LGNQALLNEQ HVATDDMTAE ITAQASQGST PVLLAIDGKA AALLAVRDPL RSDSIAALER
LHNAGYRLVM LTGDNPTTAN AIAKEAGIDE VIAGVLPDGK ADAIKRLQSQ GRQVAMVGDG
INDAPALAQA DVGIAMGGGS DVAIETAAIT LMRHSLMGVA DALAISRATL RNMKQNLLGA
FIYNSIGIPV AAGILWPFTG TLLNPVVAGA AMALSSITVV SNANRLLRFK PKA