Gene SeD_A0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0545 
Symbol 
ID6875813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp559517 
End bp560311 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content57% 
IMG OID642783765 
ProductGumN family protein 
Protein accessionYP_002214452 
Protein GI198245089 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0568025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTAT TAAATCAACT TAAACGTTTA TGGCGCGCGC TGCGTGGTAC CCCAAATAGT 
TGGCCTGCTA TCGATCTCTC CCTGCCCGGC GGTCGTCATC TGCATCTGGT TGGCAGTATC 
CATATGGGAA CGCGCGATAT GGCTCCTCTT CCAGCAAAGC TGGTGAAAAA GCTACGCCAG 
GCCGATGCGC TGGTCGTTGA AGCGGATATT TCCGGTAACG AAACGCCATT CAGCAATCTC 
CCCAAATGCC CGCCGTTGGT CGAACGTCTC AGCGCCGGGC AGCTAAGCGC ACTGGAAAAA 
CGGGTCAGCG AGTTGGGTAT GCCGCTGATC CATTTTGATA ATCAACCTTT ATGGCAGATA 
GCTATGGTGC TACAAGCCAC GCAGGCGCAA CGGCTGGGAT TGCGCCCGGA CTATGGCATT 
GATTATCAGT TATTACAGGC TGCCCGCGAA ATGTCGCTGC CGGTGCAAGA GCTGGAAGGG 
GCGAAACACC AGCTCGAACT ACTATGCGAT CTGCCCGATG GCGGGATGGC GCTGCTCGAC 
GACACGCTGA CGCACTGGCA CACCAACGCA CGGCTTTTGC AGGTGATGAT CGGCTGGTGG 
CTTGAACAGC CGCCGACCAG CGTCGGCGCT TCGCTCCCCA GAACGTTTAG CCAACCGCTG 
TATGATGTAC TGATGGTAAA ACGCAATGAA GCCTGGCGCG ACGCGCTGCT GGCACTGCCG 
CCGGGACGCT ACGTGGTAGC CGTAGGGGCG CTACATCTGT ACGGCGAAGG CAACCTACCG 
CAAATATTGA AATAA
 
Protein sequence
MELLNQLKRL WRALRGTPNS WPAIDLSLPG GRHLHLVGSI HMGTRDMAPL PAKLVKKLRQ 
ADALVVEADI SGNETPFSNL PKCPPLVERL SAGQLSALEK RVSELGMPLI HFDNQPLWQI 
AMVLQATQAQ RLGLRPDYGI DYQLLQAARE MSLPVQELEG AKHQLELLCD LPDGGMALLD 
DTLTHWHTNA RLLQVMIGWW LEQPPTSVGA SLPRTFSQPL YDVLMVKRNE AWRDALLALP 
PGRYVVAVGA LHLYGEGNLP QILK