Gene SeD_A0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0542 
SymbolushA 
ID6871729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp557067 
End bp558719 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content52% 
IMG OID642783763 
Productbifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 
Protein accessionYP_002214450 
Protein GI198244120 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TGAAACGGGG TGTGGCGCTG GCGTTACTGG CGGCGTTCGC GCTGACGACT 
CAGCCTGCAC AGGCTTACGA AAAAGATAAA ACCTATAAAA TTACTATCCT GCATACCAAC
GATCACCACG GTCACTTCTG GCGCAGCGAA TATGGCGAAT ATGGTCTGGC GGCGCAAAAA
ACGCTGGTGG ACAGTATCCG TAAAGAGGTG GCGCAAGAGG GGGGAAGCGT CCTGTTGTTA
TCCGGCGGCG ACATTAATAC CGGGGTGCCG GAATCCGATC TCCAAGATGC GGAGCCCGAT
TTCCGCGGGA TGAATCTGAT TGTCTACGAC GCTATGGCCG TCGGTAATCA TGAATTTGAT
AATCCGCTCA CCGTATTGCG CCAGCAGGAA AAGTGGGCGA AGTTTCCCTT TCTTTCCGCC
AATATTTATC AAAAAAGTAC CGGCGAGCGT CTGTTTAAGC CGTGGGCTAT TTTTACACGC
CAGGATATAA AAATCGCGGT AATCGGCTTA ACCACCGATG ACACGGCGAA AATAGGCAAC
CCGGAATATT TCACCGATAT TGAGTTTCGT AAACCTGCTG AAGAAGCAAA GGTGGTGATT
CAGGAACTTA ATATGAATGA AAAACCGGAC GTGATTATCG CGACCACGCA TATGGGACAT
TATGACAACG GCGATCACGG TTCGAACGCG CCGGGCGACG TTGAGATGGC GCGTAGCCTG
CCTGCCGGTT CGCTGGCGAT GATTGTGGGC GGTCACTCAC AAGACCCGGT ATGTATGGCG
TCGGAAAATA AAAAACAGGT GAATTACGTA CCGGGAACGC CCTGCGCGCC GGATAAGCAA
AATGGTATCT GGATCGTGCA GGCGCATGAG TGGGGTAAAT ATGTGGGCCG CGCGGATTTC
GAATTCCGTA ACGGCGAGAT GAAAATGGTT AACTACCAGC TTATTCCGGT AAATCTCAAG
AAAAAAGTGA CCTGGGATAA CGGGAAAAAC GAGCGTGTAC TTTACACGCC GGAAATCGCC
GAAAATCCGC AAATGCTCTC GTTATTAACG CCGTTCCAGA ATAAAGGTAA AGCGCAACTG
GAGGTGAAAA TTGGTAGCGT GAATGGCCTT CTTGAAGGCG ATCGCAGTAA GGTCAGATTT
GTCCAGACCA ATATGGGACG GGTGATTCTG GCTGCGCAGA TCGCGCGCAC CGGCGCCGAT
TTTGGCGTGA TGAGCGGCGG CGGTATTCGC GACTCGATTG AGGCGGGAGA TATTACCTAT
AAAAGCGTGC TCAAGGTACA GCCGTTCGGC AACATTGTGG TGTATGCCGA TATGAGCGGC
AAAGAGGTAG TTGATTATCT CACCGCCGTA GCACAGATGA AACCGGACTC CGGCGCCTAT
CCACAGTTCG CCAATGTGAG CTTTGTCGCC AAAGAGGGCA AGCTCACCGA TCTGAAAATC
AAAGGCGAGC CTGTTGATCC GGCTAAAACC TATCGCATGG CGACGCTGAG TTTCAACGCC
ACGGGCGGCG ATGGTTATCC GCGCATCGAT AACAAACCGG GATACGTGAA TACCGGGTTT
ATTGACGCGG AAGTGCTGAA AGAGTTTATT CAGCAAAATT CACCGCTGGA TGCGGCGGCG
TTTACGCCAA AAGGCGAGGT GAGCTGGCTG TAG
 
Protein sequence
MKFLKRGVAL ALLAAFALTT QPAQAYEKDK TYKITILHTN DHHGHFWRSE YGEYGLAAQK 
TLVDSIRKEV AQEGGSVLLL SGGDINTGVP ESDLQDAEPD FRGMNLIVYD AMAVGNHEFD
NPLTVLRQQE KWAKFPFLSA NIYQKSTGER LFKPWAIFTR QDIKIAVIGL TTDDTAKIGN
PEYFTDIEFR KPAEEAKVVI QELNMNEKPD VIIATTHMGH YDNGDHGSNA PGDVEMARSL
PAGSLAMIVG GHSQDPVCMA SENKKQVNYV PGTPCAPDKQ NGIWIVQAHE WGKYVGRADF
EFRNGEMKMV NYQLIPVNLK KKVTWDNGKN ERVLYTPEIA ENPQMLSLLT PFQNKGKAQL
EVKIGSVNGL LEGDRSKVRF VQTNMGRVIL AAQIARTGAD FGVMSGGGIR DSIEAGDITY
KSVLKVQPFG NIVVYADMSG KEVVDYLTAV AQMKPDSGAY PQFANVSFVA KEGKLTDLKI
KGEPVDPAKT YRMATLSFNA TGGDGYPRID NKPGYVNTGF IDAEVLKEFI QQNSPLDAAA
FTPKGEVSWL