| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0539 |
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| Symbol | |
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| ID | 6874232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 553783 |
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| End bp | 555459 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642783760 |
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| Product | putative cation:proton antiport protein |
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| Protein accession | YP_002214447 |
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| Protein GI | 198244213 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCACG CTACCCCGCT TATCACCACC ATTGTCGGCG GCCTTGTGCT CGCTTTTATT
CTCGGCATGA TTGCCAACAA ATTGCGTATT TCTCCACTGG TGGGATATCT GTTAGCGGGC
GTTCTGGCGG GACCTTTTAC CCCGGGTTTT GTTGCGGATA CCAAACTGGC GCCGGAGCTG
GCGGAGCTCG GCGTGATTCT ATTGATGTTC GGCGTCGGGC TGCATTTTTC GCTGAAGGAT
TTGATGGCGG TAAAGTCTAT CGCCATTCCC GGCGCTGTCG CTCAGATAGC GGTGGCGACG
CTGCTGGGTA TGGCGCTTTC CGCCGTGCTG GGATGGTCAT TAATGACCGG CATCGTTTTT
GGGCTCTGTC TGTCTACCGC CAGTACCGTC GTCCTGCTGC GCGCGCTTGA GGAGCGACAA
CTCCTTGATA GCCAGCGCGG GCAAATCGCC ATCGGCTGGC TGATTGTCGA AGATCTGGTG
ATGGTGCTGA CGCTGGTCTT GCTGCCCGCC GTTGCCGGCA TGGTGGAAAA AGGCGATGTC
GGCATAGCCT CGCTGACAGT CGATATGGGG ATAACCATTG GTAAAGTGGT GGCGTTTATC
GCCATCATGA TGCTGGTAGG ACGCCGCCTG GTGCCGTGGA TTATGGCCCG CAGCGCCGCC
ACCGGCTCGC GCGAATTATT TACCCTTTCC GTACTGGCGC TGGCGTTAGG CATTGCGTTT
GGCGCGGTAG AACTGTTTGA CGTCTCTTTT GCGCTGGGCG CGTTCTTCGC TGGAATGGTG
CTTAATGAGT CGGAACTGAG TCACCGGGCG GCGCACGATA CGTTGCCGCT GCGCGACGCC
TTTGCCGTCC TGTTTTTTGT TTCCGTTGGC ATGTTGTTCG ATCCGTTAGT CTTGATCCAA
CAGCCGCTGG CGGTGCTGGC GACGCTTGCC ATTATCGTCT TTGGTAAATC GATCGCTGCG
TTTTTCCTGG TGCGTATGTT CGGCCACTCG CCGCGAACCG CGCTGACCAT TGCCGCCAGC
CTGGCGCAAA TCGGCGAGTT CGCCTTTATT CTCGCCGGAC TCGGCATGGC GCTCAACCTG
CTGCCGCAGG CGGGACAGAA CCTGGTGCTG GCAGGCGCTA TTTTGTCGAT TATGCTTAAT
CCCGTACTGT TTACCCTGCT GGAGAAGTAT CTGGCGAAAA CCGAAACGCT GGAAGAGCAA
ACTCTGGAAG AGGCTATCGA AGAAGAGAAG CAAATTCCGG TGGATATCTG TAATCATGCC
CTGCTGGTGG GTTTTGGCCG CGTAGGCAGT CTGCTGGGAG AAAAATTACT GGCGGCGGGG
ATTCCGCTGG TGGTTATCGA AACGTCCCGT ACCCGCGTGG ATGAACTGCG CGAACGCGGG
ATTCGCGCCG TGCTGGGCAA CGCCGCTAAC GAAGAAATCA TGAATCTGGC GCATCTGGAC
TGCGCCCGCT GGCTGTTATT GACCATCCCC AACGGTTACG AAGCCGGTGA GATTGTCGCC
TCAGCGCGGG AAAAAAGTCC TGATATCGAG ATAATCGCCC GCGCACACTA TGATGATGAA
GTGAAATATA TTACCGAGCG GGGAGCCAAT CAGGTAGTGA TGGGCGAGCG AGAAATTGCC
CGGGCGATGT TGGAACTGCT TGAAACGCCG CCCGCAGGTG AAGTCGTCGC CAGTTAA
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| Protein sequence | MHHATPLITT IVGGLVLAFI LGMIANKLRI SPLVGYLLAG VLAGPFTPGF VADTKLAPEL
AELGVILLMF GVGLHFSLKD LMAVKSIAIP GAVAQIAVAT LLGMALSAVL GWSLMTGIVF
GLCLSTASTV VLLRALEERQ LLDSQRGQIA IGWLIVEDLV MVLTLVLLPA VAGMVEKGDV
GIASLTVDMG ITIGKVVAFI AIMMLVGRRL VPWIMARSAA TGSRELFTLS VLALALGIAF
GAVELFDVSF ALGAFFAGMV LNESELSHRA AHDTLPLRDA FAVLFFVSVG MLFDPLVLIQ
QPLAVLATLA IIVFGKSIAA FFLVRMFGHS PRTALTIAAS LAQIGEFAFI LAGLGMALNL
LPQAGQNLVL AGAILSIMLN PVLFTLLEKY LAKTETLEEQ TLEEAIEEEK QIPVDICNHA
LLVGFGRVGS LLGEKLLAAG IPLVVIETSR TRVDELRERG IRAVLGNAAN EEIMNLAHLD
CARWLLLTIP NGYEAGEIVA SAREKSPDIE IIARAHYDDE VKYITERGAN QVVMGEREIA
RAMLELLETP PAGEVVAS
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