Gene SeD_A0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0522 
Symbol 
ID6875223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp537848 
End bp541204 
Gene Length3357 bp 
Protein Length1118 aa 
Translation table11 
GC content53% 
IMG OID642783744 
Productpotassium efflux protein KefA 
Protein accessionYP_002214431 
Protein GI198242010 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.97346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGC TTTATAAACG TTCACAGCAT TTTGTTTTTA TTACAATTAG CGTCCTTATT 
ATCCTGCTGT CCTGTCAGTC TCTGGCATTT GCCCGGGGGC AAACGAATGG CGACCTGCCG
TCAAAAGCGG ATGTGCAAAA CCAGCTGGAT ACGCTGAATA AGCAAAAAGA TCTCTCCGCC
CAGGATAAGC TCGTCCAGCA GGACCTTATT GATACGTTAG CTACGCTGGA GAAAATCGAG
CGGGTAAAAG AGGAGACCGT ACAGCTACGG CAGAAGGTGG CGCAGGCGCC TGAAAAAATG
CGTCAGGCGA CGGCTGCGTT GAATGCGCTG AGCGACGTCG ATAATGATGA TGAAATGCGA
AAAACGCTGA GTGCGCTTTC GTTACGTCAG CTTGAGCTGC GCGTGGCGCA GGTACTGGAT
GATTTGCAAA ATTCGCAAAA CGATCTTGCC GCTTATAACA GCCAGCTTGT TTCGCTACAG
ACCCAGCCTG AGCGCGTGCA AAACGCCATG TATACCGCCT CACAGCAAAT ACAGCAAATC
CGTAACCGTC TGGACGGCAA TAACGTCGGC GAAGCCGCGC TTCGCCCCAG CCAACAGGTG
TTATTACAGG CACAACAGGC GCTGCTTAAT GCGCAGATCG ACCAGCAACG TAAGAGTCTT
GAAGGAAATA CCGTTTTGCA GGACACCCTG CAAAAACAGC GGGATTACGT GACGGCCAAC
AGTAATCGCC TTGAACATCA GCTTCAACTT TTACAGGAGG CGGTCAACAG TAAACGACTT
ACGCTAACGG AAAAAACGGC CCAGGAGGCC ATTTCGCCGG ACGAAACGGC GCGTATCCAG
GCGAACCCGC TGGTAAAACA GGAACTGGAT ATTAACCATC AACTCAGCCA GCGTCTGATT
GTCGCGACCG AAAACGGCAA TATGTTGATG CAGCAAAACA TTAAAGTAAA AAACTGGCTC
GATCGCGCGC TGCAGTCGGA AAGAAATATC AAAGAACAGA TTGCCGTCTT AAAAGGCAGC
CTGTTGCTGT CGCGTATTCT TTATCAACAG CAGCAAACCC TGCCCTCCGC CGACGAACTC
GAAGATATGA CCAACCGCAT TGCGGATTTG CGTCTGGAGC AGTTTGAAAT CAACCAGCAG
CGTGATGCCT TATTCCAAAG CGATGCCTTT GTCGACAAGC TGGAGGAGGG GCATACCAGC
GAGGTGAATG ATGAAGTTCA TGATGCGTTG CTTCAGGTGG TGGAGATGCG CCGTGAGCTA
TTGGATCAGC TAAATAAACA GTTGGGTAAC CAGCTGATGA TGGCGATTAA CCTGCAAGTT
AACCAGCAGC AGTTGATGAG CGTCTCGAAA AATCTGAAAG CCATTCTGAC GCAGCAGATT
TTTTGGGTGA ACAGTAACCG CCCTATGGAC TGGGACTGGC TTAAAGCGTT CCCCCAAACG
TTAAAAGAGC AATTCAGCGC CATGAAAATC ACGGTGAACT GGCAAAAAGC CTGGCCCGCG
GTATTTATTG CTTTTTTGGC CGGGTTGCCG CTCTTGCTCA TCGCCGGTTT AATCCGCTGG
CGTCTGAAAT GGTTAAAAGC GTATCAACAG AAGCTGGCCG CCGCCGTGGG AGCGTTGCGT
AACGATAGTC AGCTCAATAC GCCAAAAGCT ATTCTGATCG ATCTGATCCG CGCGCTGCCG
GTGTGCCTGA TTATCCTCGC GCTTGGACTG ATCCTGCTGA CCATGCAGCT AAATATCAGC
GATCTGCTCT GGGCCTTTAG TAAAAAGCTC GCAATGTTCT GGCTGGTCTT TGGGCTGTGC
TGGAAGGTGC TGGAAAAAGA GGGCGTGGCA ATACGCCATT TCGGTATGCC AGCGCAGTTG
ACCAGCCACT GGCGTCGCCA GATTGTACGC ATTAGCCTCG CATTGCTGCC GCTGCACTTT
TGGTCTGTGG TGGCGGAGTT GTCGCCGCTG AATCTGATGG ATGACGTGCT GGGGCAGGCG
GTTATTTTCC TCAATCTGCT GGTCATAACA TTGCTGGTGT GGCCACTGTG CCGGGAAAGC
TGGCGCGATA AAGAATCTCA CGGCATTCGA CTGGTGACCG TGACGATTCT TTCCATTATT
CCGGTGGCGT TAATGGTATT AACGGCGACC GGCTATTTCT ATACCACCCT GCGCCTGGCG
GAGCGCTGGA TTGAAACCGT CTATCTGGTC ATTATCTGGA ACCTGCTTTA TCAAACGGTG
CTGCGCGGGT TAAGCGTAGC GGCGCGCCGG ATTGCCTGGC GACGCGCGCT GGCTCGTCGT
CAGAACCTGG TAAAAGAGGG AGCGGAAGGC GCGGAGCCAC AGGAAGAACC CGCCATCGCG
TTGGAGCAGA TTAACCAGCA AACATTACGT ATCACGATGC TGCTAATGCT TGCCCTGTTC
GGCGTTATGT TCTGGGCGAT TTGGTCCGAT TTGATCACCG TATTCAGCTA TCTTGATAGC
ATCACGCTGT GGCACTACAA CGGCTCCGAA GCTGGCGCTG CGGTGGTGAA AAGCGTGACG
ATGGGCAGCT TGCTATTCGC CATTATTGCC GCGATGGTGG CCTGGGCGCT CATCCGCAAC
TTACCCGGCC TGTTGGAAGT GCTGGTGCTT TCACGTCTGA ATATGCGCCA GGGGGCTTCG
TATGCGATCA CCACGATCCT TAACTACGTC ATTATCGCTG TTGGCGCGAT GACAGTATTC
GGATCGCTCG GCGTCTCGTG GGATAAACTC CAGTGGCTGG CGGCGGCGTT GTCGGTGGGT
CTCGGTTTTG GGCTACAGGA GATCTTCGGT AACTTTGTCT CGGGTTTAAT CATCCTCTTC
GAACGTCCGG TACGCATTGG CGATACGGTA ACGATCGGCA CCTATTCCGG CACGGTCAGT
AAGATTCGTA TTCGCGCCAC CACTATTACC GATTTTGATC GTAAAGAAGT GATCATTCCG
AACAAAGCAT TCGTAACGGA GCGGCTGATT AACTGGTCCC TCTCCGATAC CACGACACGT
CTGGTGATCC GGCTTGGCGT GGCTTATGGC TCGGATCTGG AGAAAGTGAA AAGAGTCCTG
CTACAGGCGG CGATGGAGCA TCCGAAGGTG ATGCACGATC CGGAACCTGC CGTATTCTTC
ACCACCTTTG GCGCCAGCAC TCTGGATCAT GAACTGCGTC TGTATGTGCG TGAATTGCGC
GATCGTAGCC ATACGGTGGA TGAACTGAAC CGCGCGATCG ATCGACTGTG CCGTGAAAAT
GATATCAATA TCGCCTTTAA CCAGCTTGAG GTGCATCTGC ATAACGCGAA GGGCGACGAA
GTCACTGAAG TGAAGCGCGA TCTCAACGGC GGCGATCTGG CGCCTACGGC AAGCTAA
 
Protein sequence
MLQLYKRSQH FVFITISVLI ILLSCQSLAF ARGQTNGDLP SKADVQNQLD TLNKQKDLSA 
QDKLVQQDLI DTLATLEKIE RVKEETVQLR QKVAQAPEKM RQATAALNAL SDVDNDDEMR
KTLSALSLRQ LELRVAQVLD DLQNSQNDLA AYNSQLVSLQ TQPERVQNAM YTASQQIQQI
RNRLDGNNVG EAALRPSQQV LLQAQQALLN AQIDQQRKSL EGNTVLQDTL QKQRDYVTAN
SNRLEHQLQL LQEAVNSKRL TLTEKTAQEA ISPDETARIQ ANPLVKQELD INHQLSQRLI
VATENGNMLM QQNIKVKNWL DRALQSERNI KEQIAVLKGS LLLSRILYQQ QQTLPSADEL
EDMTNRIADL RLEQFEINQQ RDALFQSDAF VDKLEEGHTS EVNDEVHDAL LQVVEMRREL
LDQLNKQLGN QLMMAINLQV NQQQLMSVSK NLKAILTQQI FWVNSNRPMD WDWLKAFPQT
LKEQFSAMKI TVNWQKAWPA VFIAFLAGLP LLLIAGLIRW RLKWLKAYQQ KLAAAVGALR
NDSQLNTPKA ILIDLIRALP VCLIILALGL ILLTMQLNIS DLLWAFSKKL AMFWLVFGLC
WKVLEKEGVA IRHFGMPAQL TSHWRRQIVR ISLALLPLHF WSVVAELSPL NLMDDVLGQA
VIFLNLLVIT LLVWPLCRES WRDKESHGIR LVTVTILSII PVALMVLTAT GYFYTTLRLA
ERWIETVYLV IIWNLLYQTV LRGLSVAARR IAWRRALARR QNLVKEGAEG AEPQEEPAIA
LEQINQQTLR ITMLLMLALF GVMFWAIWSD LITVFSYLDS ITLWHYNGSE AGAAVVKSVT
MGSLLFAIIA AMVAWALIRN LPGLLEVLVL SRLNMRQGAS YAITTILNYV IIAVGAMTVF
GSLGVSWDKL QWLAAALSVG LGFGLQEIFG NFVSGLIILF ERPVRIGDTV TIGTYSGTVS
KIRIRATTIT DFDRKEVIIP NKAFVTERLI NWSLSDTTTR LVIRLGVAYG SDLEKVKRVL
LQAAMEHPKV MHDPEPAVFF TTFGASTLDH ELRLYVRELR DRSHTVDELN RAIDRLCREN
DINIAFNQLE VHLHNAKGDE VTEVKRDLNG GDLAPTAS