Gene SeD_A0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0521 
SymbolacrR 
ID6871335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp537070 
End bp537723 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID642783743 
ProductDNA-binding transcriptional repressor AcrR 
Protein accessionYP_002214430 
Protein GI198245751 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0327711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAA AAACCAAACA ACAAGCGCTG GAGACACGAC AACACATCCT GGATGTGGCC 
CTGCGTTTGT TCTCGCAGCA AGGCGTATCA GCAACCTCGC TGGCGGAGAT TGCGAACGCT 
GCTGGCGTGA CGCGCGGCGC AATCTATTGG CATTTCAAAA ATAAGTCGGA TTTATTCAGT 
GAGATCTGGG AGCTATCAGA ATCCAATATT GGTGAGCTTG AGATTGAGTA TCAGGCAAAA 
TTCCCCGACG ATCCACTATC TGTATTAAGA GAAATTTTAG TTCATATTCT TGAAGCTACT 
GTAACAGAAG AACGACGCCG CTTATTGATG GAGATTATAT TCCATAAATG TGAGTTTGTC 
GGAGAAATGG TTGTGGTTCA ACAGGCGCAA CGTAGCCTTT GTCTGGAAAG TTACGATCGG 
ATTGAACAAA CGTTAAAACA TTGTATTAAT GCTAAAATGC TGCCTGAAAA TCTGCTGACT 
CGTCGTGCGG CGATACTGAT GCGCAGCTTT ATTTCAGGGC TCATGGAAAA CTGGTTATTT 
GCTCCGCAAT CGTTTGATTT AAAAAAAGAA GCTCGCGCCT ACGTCACGAT CCTGCTGGAG 
ATGTATCAAT TGTGTCCGAC GCTGCGCGCG TCGACGTTCA ACGGCTCCCC CTGA
 
Protein sequence
MARKTKQQAL ETRQHILDVA LRLFSQQGVS ATSLAEIANA AGVTRGAIYW HFKNKSDLFS 
EIWELSESNI GELEIEYQAK FPDDPLSVLR EILVHILEAT VTEERRRLLM EIIFHKCEFV 
GEMVVVQQAQ RSLCLESYDR IEQTLKHCIN AKMLPENLLT RRAAILMRSF ISGLMENWLF 
APQSFDLKKE ARAYVTILLE MYQLCPTLRA STFNGSP