Gene SeD_A0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0520 
SymbolacrA 
ID6875629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp535735 
End bp536928 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content55% 
IMG OID642783742 
Productacriflavine resistance protein A 
Protein accessionYP_002214429 
Protein GI198242104 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0763854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA ACAGAGGGTT AACGCCTCTG GCGGTCGTTC TGATGCTCTC AGGCAGCTTA 
GCGCTAACAG GATGTGACGA CAAACAGGAC CAGCAAGGCG GCCAGCAGAT GCCAGAAGTT
GGAGTTGTCA CACTAAAAAC GGAACCACTG CAAATCACAA CTGAACTTCC GGGTCGTACC
GTTGCTTACC GTATCGCCGA AGTTCGCCCA CAGGTAAGCG GCATTATCCT GAAGCGTAAT
TTCGTTGAGG GAAGTGATAT CGAAGCGGGA GTCTCTCTCT ATCAGATTGA TCCTGCGACC
TACCAGGCGA CTTACGACAG CGCTAAGGGC GATCTGGCAA AAGCGCAGGC CGCCGCGAAT
ATCGCTGAAC TGACGGTGAA GCGTTATCAA AAGCTGCTGG GTACGCAGTA CATCAGTAAG
CAGGAATACG ATCAGGCGCT GGCTGACGCG CAACAAGCGA CTGCCGCCGT TGTCGCAGCA
AAAGCCGCCG TTGAAACCGC ACGTATCAAC CTGGCGTATA CCAAAGTCAC CTCGCCGATT
AGCGGTCGTA TTGGTAAGTC GTCCGTAACG GAAGGCGCGC TGGTACAGAA CGGTCAGGCG
TCGGCGCTGG CGACAGTGCA GCAGCTGGAC CCTATTTATG TCGATGTGAC CCAGTCCAGC
AATGACTTCC TGCGCCTGAA GCAGGAGCTG GCAAATGGTT CGCTGAAACA GGAAAACGGC
AAAGCGAAGG TCGATCTGGT GACCAGCGAC GGTATCAAAT TCCCGCAGTC CGGTACGCTT
GAGTTCTCCG ACGTGACCGT TGACCAAACC ACCGGGTCTA TTACTTTGCG CGCCATCTTC
CCTAACCCGG ATCACACCTT ATTGCCAGGA ATGTTCGTTC GCGCACGTCT GCAGGAAGGG
ACAAAACCGA CGGCATTACT GGTTCCACAA CAGGGCGTTA CCCGTACTCC ACGCGGCGAT
GCCACGGTGC TGGTGGTTGG CGCTGATAAC AAAGTGGAAA CCCGCCAAAT CGTCGCAAGC
CAGGCGATCG GCGATAAGTG GCTGGTGACT GACGGGTTGA AAGCGGGCGA CCGCGTAGTC
GTCAGCGGGC TGCAAAAAGT ACGTCCTGGC GCACAGGTTA AAGTGCAGGA AATTACCGCG
GATAACAAAC AGCAAGCCGC AAGCGGTGAT CAACCTGCTC AGCCCAGGTC TTAA
 
Protein sequence
MNKNRGLTPL AVVLMLSGSL ALTGCDDKQD QQGGQQMPEV GVVTLKTEPL QITTELPGRT 
VAYRIAEVRP QVSGIILKRN FVEGSDIEAG VSLYQIDPAT YQATYDSAKG DLAKAQAAAN
IAELTVKRYQ KLLGTQYISK QEYDQALADA QQATAAVVAA KAAVETARIN LAYTKVTSPI
SGRIGKSSVT EGALVQNGQA SALATVQQLD PIYVDVTQSS NDFLRLKQEL ANGSLKQENG
KAKVDLVTSD GIKFPQSGTL EFSDVTVDQT TGSITLRAIF PNPDHTLLPG MFVRARLQEG
TKPTALLVPQ QGVTRTPRGD ATVLVVGADN KVETRQIVAS QAIGDKWLVT DGLKAGDRVV
VSGLQKVRPG AQVKVQEITA DNKQQAASGD QPAQPRS