Gene SeD_A0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0517 
Symbol 
ID6873521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp531447 
End bp531665 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content40% 
IMG OID642783739 
Producthemolysin expression-modulating protein 
Protein accessionYP_002214426 
Protein GI198242168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000983246 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA AACCATTAAC TAAAACTGAT TATTTGATGC GTTTACGGCG CTGTCAGACA 
ATTGACACTC TGGAGCGCGT CATTGAGAAA AATAAATATG AATTGTCCGA CAATGAGCTG 
GCTGTATTTT ACTCAGCTGC GGATCACCGT CTTGCAGAAT TGACGATGAA CAAACTCTAC 
GACAAGATCC CCTCTTCAGT ATGGAAATTC ATTCGTTAA
 
Protein sequence
MSDKPLTKTD YLMRLRRCQT IDTLERVIEK NKYELSDNEL AVFYSAADHR LAELTMNKLY 
DKIPSSVWKF IR