Gene SeD_A0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0509 
Symbol 
ID6872087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp526670 
End bp527239 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content54% 
IMG OID642783732 
Productputative lipoprotein 
Protein accessionYP_002214419 
Protein GI198245558 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.668519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG TGCACATCGT AAGTGGTTTA GCGGTTGCGA TATCTCTGGC GGCCTGCGCT 
GATAAAAGCG CTGATATCCA GACGCCTGCG CCAAACCCTA ACATGTCGAT TACAGCTAAC 
CAGTCTACTA TTCAGCAACC CAATGTTTCC GGTACCGTCT GGATCCGCCA GAAGGTCGCT 
CTGCCGCCAG ATGCGGTGCT GACCGTGACG CTTTCAGATG CTTCGCTGGC TGATGCGCCG 
TCTAAGGTGC TGTCGCAAAA AGCGGTACGT ACCGAAGGTA AACAGGCGCC TTTCAGTTTT 
GTGTTGCCGT TTAACCCATC AGATATTCAA CCTAACGCGC GTATTCTCCT GAGCGCGGCC 
ATCACCGTTG ACAATAAGCT GGTATTTATT ACCGATAGCG TGAAACCGGT GATTAACAAT 
GGCGGCACTA AAGCGGATCT GACGCTGGTA CCGGTACAGC AAACGGCGGT GCCTGTGCAG 
GCCAGCGGTG GTGCGACGAC GACGGTTCCA TCGACTTCGC CGACCCAGGT CAATCCGTCT 
TCTGCCGTTC CTGCGCCTAC CCAGTATTAA
 
Protein sequence
MKLVHIVSGL AVAISLAACA DKSADIQTPA PNPNMSITAN QSTIQQPNVS GTVWIRQKVA 
LPPDAVLTVT LSDASLADAP SKVLSQKAVR TEGKQAPFSF VLPFNPSDIQ PNARILLSAA 
ITVDNKLVFI TDSVKPVINN GGTKADLTLV PVQQTAVPVQ ASGGATTTVP STSPTQVNPS 
SAVPAPTQY