Gene SeD_A0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0503 
Symbol 
ID6874125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp520080 
End bp521852 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content56% 
IMG OID642783726 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_002214413 
Protein GI198244286 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATTAT TTGCTCAATT AAGCTGGTAC TTTCGCCGGG AATGGCGTCG CTATCTTGGC 
GCGGTGGCCC TGCTTATGCT TATTGCGATG CTTCAGCTGA TCCCGCCCAA AGTGGTGGGG
ATTGTCGTGG ATGGCGTAAC CGCACAGCAT TTTACTCCAG GCCGAATAGC GATGTGGATT
GGCACCATTG CCCTGATCGC CGTAGTGGTC TATTTGTTGC GCTATGTCTG GCGCGTGCTG
CTGTTTGGCG CTTCTTATCA ATTAGCCGTT GAACTGCGTG AAGATTATTA TCGCCAGTTG
AGTCGTCAGC ATCCTGAATT TTATCAGCGC CATCGGACGG GCGATCTTAT CGCGCGTGCG
ACGAATGATG TGGATCGCGT CGTATTTGCG GCGGGCGAGG GCGTTCTGAC GCTGGTTGAC
TCGCTGGTAA TGGGCTGCGC GGTACTGATT GTCATGTCGA CGCAAATTAG CTGGCAGCTA
ACGCTATTAG CGCTGTTGCC GATGCCGATT ATGGCGCTGA TGATCAAACG TTACGGCGAT
CGGCTGCATG ACTATTTCAA ACTGGCGCAG GCCGCCTTCT CCAGCCTGAA CGACCGCACG
CAGGAGAGTC TGACCAGCAT CCGTATGATC AAAGCGTTTG GTCTGGAGGA CCGCCAGTCT
TCGCTGTTTG CGGCGGATGC CGAAGATACC GGCAAGAAAA ATATGCGCGT GGCGCGTATT
GACGCGCGTT TTGATCCAAC CATTTACATC GCCATTGGCA TGGCGAACCT GCTCGCGATT
AGCGGCGGAA GCTGGATGGT GGTTAACGGC AGCCTGACGC TGGGCGAACT CACCAGCTTT
ATGATGTATC TGGGGTTGAT GATTTGGCCG ATGCTGGCGC TGGCCTGGAT GTTTAATATC
GTGGAGCGGG GGAGCGCCGC TTACAGCCGC ATCCGCGCCA TGCTGGCGGA AGCGCCGGTA
GTTAAGGATG GCGAAGAGCC GGTCCCGGCG GGGCGCGGCG AACTGACGGC GGCCATTCGT
GAGTTTTGCT ATCCGCAAAC GACGCATCCG GCGCTGGAGA ATGTGAACTT TCGTCTTAAA
CCGGGTCAGA TGCTGGGGAT ATGCGGTCCG ACCGGCGCGG GGAAAAGCAC AATATTGTCG
CTTATCCAGC GCCATTTTGA TGTGACGCAG GGAGAGATCC GTTTCCATGA CGTGCCGTTG
ACGCATCTGC AGCTGGATAG CTGGCGTAGC CGACTGGCGG TCGTCAGCCA GACGCCGTTT
TTGTTCTCGG ACTCTATTGC CAATAATATT GCGCTCGGAC GCCCGGAGGC GACTCAGGAG
GAGATTGAAC AGGTGGCGCG TTTAGCCAGC GTACATGAGG ATATTCTCCG TTTGCCTCAG
GGCTACGACA CGCAGGTAGG TGAACGTGGC GTCATGTTAT CGGGAGGGCA AAAACAGCGT
ATCTCGATTG CCAGAGCGCT ACTGTTAAAT GCGGAAATTC TGCTTCTCGA TGATGCGCTT
TCTGCAGTAG ATGGCCGCAC GGAGCATCAG ATTTTGCATA ATTTGCGCCA GTGGGGCGAA
GGGCGTACGG TCATCATCAG CGCGCATCGT TTATCCGCGC TGACCGACGC CAATGAAATT
ATCGTTATGC AACATGGCCA TGTTGTTCAG CGCGGCGATC ACGATCAACT GGCGCAGCAG
ATTGGCTGGT ATCGCGATAT GTATCGCTAT CAGCAACTGG AGGCCGCTCT GGATGACGCG
CCGGAACGCG GCGAGGAGGC GGTGAGTGCG TAG
 
Protein sequence
MRLFAQLSWY FRREWRRYLG AVALLMLIAM LQLIPPKVVG IVVDGVTAQH FTPGRIAMWI 
GTIALIAVVV YLLRYVWRVL LFGASYQLAV ELREDYYRQL SRQHPEFYQR HRTGDLIARA
TNDVDRVVFA AGEGVLTLVD SLVMGCAVLI VMSTQISWQL TLLALLPMPI MALMIKRYGD
RLHDYFKLAQ AAFSSLNDRT QESLTSIRMI KAFGLEDRQS SLFAADAEDT GKKNMRVARI
DARFDPTIYI AIGMANLLAI SGGSWMVVNG SLTLGELTSF MMYLGLMIWP MLALAWMFNI
VERGSAAYSR IRAMLAEAPV VKDGEEPVPA GRGELTAAIR EFCYPQTTHP ALENVNFRLK
PGQMLGICGP TGAGKSTILS LIQRHFDVTQ GEIRFHDVPL THLQLDSWRS RLAVVSQTPF
LFSDSIANNI ALGRPEATQE EIEQVARLAS VHEDILRLPQ GYDTQVGERG VMLSGGQKQR
ISIARALLLN AEILLLDDAL SAVDGRTEHQ ILHNLRQWGE GRTVIISAHR LSALTDANEI
IVMQHGHVVQ RGDHDQLAQQ IGWYRDMYRY QQLEAALDDA PERGEEAVSA