Gene SeD_A0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0501 
Symbol 
ID6875171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp518413 
End bp519468 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content55% 
IMG OID642783724 
Productpyridoxal-5'-phosphate-dependent enzyme subunit beta 
Protein accessionYP_002214411 
Protein GI198245198 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGTA GCAATTGGGT TAAAAATGCC ATTAATGAAA TTAACGCTGA CCACCAGCGC 
TCGGCGGATA CGCATCTTAT TCGTTTGCCC CTGTCGGCAT TTCCAGGTAT CCAGCTTTAC
CTGAAAGACG AAAGCACGCA TCCCACCGGT AGCCTCAAGC ATCGTCTGGC GCGCTCGCTG
TTCCTTTATG GGTTGTGCAA TGGCTGGATT AAAGAAGGCA CTCCGATTAT TGAAGCATCA
TCAGGCTCAA CGGCGATTTC CGAAGCCTGG TTCGCGCGTT TACTGGGACT GCCGTTCATC
GCCGTCATGC CCGCCTGTAC CGCAAAACGT AAAATCGAAC AGATTCAATT TTACGGCGGC
CACTGTCATT TTGTGGAGAG CGCCTGCGAA ATTTATGCCG CCTCCGAGCG GCTGGCGCAT
GAACTGAACG GTCACTATAT GGACCAGTTT ACCTACGCAG AACGAGCTAC CGACTGGCGG
GGCAACAATA ATATTGCCGA CAGTATTTTC CGCCAGATGC GCAACGAACC CCATCCGGTA
CCGCGATTTA TCGTCATGAG CGCCGGAACG GGCGGAACCT CTGCGACGAT TGGGCGCTAT
ATTCGCTGCC AGGGCTATGA TACTCAGCTC ATGGTGGTGG ATCCGGAAAA TTCCGTCTTT
TTACCTTACT GGCAGGATCG CGACGCTTCA TTACGCAGCC CGGTAGGCAG TAAAATTGAA
GGAATTGGTC GTCCGCGAGT AGAGCCTTCT TTTATTCCGG ATGTCGTGGA TGAGATGCTG
CGCGTGCCGG ACGCCGCCAG CGTTGCCACC GCACACTGGC TGGAAACGCA GCTAGGCCGT
AAAGTCGGCG CCTCTACCGG CACGAATATG TGGGGAGCGC TGCAGCTTGC GGCCCGGATG
CGCGAGGCTG GAGAAACCGG CGCTATCGTG ACGTTATTGT GCGATAGCGG CGATCGCTAT
CTGGATACCT ATTACCATCC GGCCTGGGTT AGCGACCATA TCGGCGATTT GACGCCGTGG
TCAGCGGCCA TCGCAAAATT ACTTACCGGC GACTAG
 
Protein sequence
MMSSNWVKNA INEINADHQR SADTHLIRLP LSAFPGIQLY LKDESTHPTG SLKHRLARSL 
FLYGLCNGWI KEGTPIIEAS SGSTAISEAW FARLLGLPFI AVMPACTAKR KIEQIQFYGG
HCHFVESACE IYAASERLAH ELNGHYMDQF TYAERATDWR GNNNIADSIF RQMRNEPHPV
PRFIVMSAGT GGTSATIGRY IRCQGYDTQL MVVDPENSVF LPYWQDRDAS LRSPVGSKIE
GIGRPRVEPS FIPDVVDEML RVPDAASVAT AHWLETQLGR KVGASTGTNM WGALQLAARM
REAGETGAIV TLLCDSGDRY LDTYYHPAWV SDHIGDLTPW SAAIAKLLTG D