Gene SeD_A0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0497 
Symbol 
ID6873265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp514984 
End bp515679 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID642783722 
Productqueuosine biosynthesis protein QueC 
Protein accessionYP_002214409 
Protein GI198243409 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG CCGTTGTTGT ATTTAGTGGA GGTCAGGACT CCACCACTTG TCTGGCGCAA 
GCGCGGCATC AGTATGATGA AGTGCATTGT GTCACGTTTG ATTATGGTCA GCGCCACCGC
GCAGAGATTG ATGTCGCGCG GGCGCTGGCG TTAAAACTTG GCGCACGCGC GCATAAAGTG
CTGGATGTCA CTTTGCTGAA CGAACTGGCG GTCAGCAGCC TGACGCGGGA TAGCATTCCG
GTGCCGGACT ATGAACCGAA CGCTGACGGT ATCCCCAATA CTTTCGTACC GGGACGCAAT
ATTCTCTTTC TGACGCTGGC GGCGATTTAC GCTTATCAGG TTAAAGCCGA AGCGGTGATC
ACTGGCGTTT GCGAGACCGA TTTTTCCGGC TATCCAGACT GTCGCGATGA GTTCGTCAAA
GCGCTGAATC ACGCGGTGAA TCTGGGCATG GCGAAAGATA TCCGTTTCGA AACGCCCTTA
ATGTGGATTG ATAAAGCTGA AACCTGGGCG CTGGCCGATT ATTGGGGCCA ACTGGATTTG
GTTCGCGAAG AGACGCTGAC CTGCTATAAC GGCATTAAAG GCGATGGCTG TGGTCATTGC
GCGGCCTGTA ATCTGCGCGC TAACGGCCTG AATCATTATC TGTCGAATAA AGCGGCGGTG
ATGGCGGCAA TGAAGCAAAA AACCGGGTTA AGGTGA
 
Protein sequence
MKRAVVVFSG GQDSTTCLAQ ARHQYDEVHC VTFDYGQRHR AEIDVARALA LKLGARAHKV 
LDVTLLNELA VSSLTRDSIP VPDYEPNADG IPNTFVPGRN ILFLTLAAIY AYQVKAEAVI
TGVCETDFSG YPDCRDEFVK ALNHAVNLGM AKDIRFETPL MWIDKAETWA LADYWGQLDL
VREETLTCYN GIKGDGCGHC AACNLRANGL NHYLSNKAAV MAAMKQKTGL R