| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0490 |
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| Symbol | clpP |
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| ID | 6874464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 506415 |
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| End bp | 507146 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642783715 |
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| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
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| Protein accession | YP_002214402 |
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| Protein GI | 198242637 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00691281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.831328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATTATG GCGATGCCGT ACCCATTACA GAGGGACTGG CTGATAATCC GTCCATCAGG
TTACAATCAG TACAGCAGGT TTTTTCAATT TTTATCCAGG AGACGGAAAT GTCATACAGC
GGAGAACGAG ATAATTTGGC CCCTCATATG GCGCTGGTGC CGATGGTCAT TGAACAGACC
TCACGCGGTG AGCGCTCTTT TGATATCTAT TCTCGTCTAC TTAAGGAACG CGTCATATTT
CTGACCGGCC AGGTCGAAGA CCATATGGCT AACCTGATCG TGGCGCAGAT GCTGTTCCTG
GAAGCGGAAA ACCCGGAAAA AGATATCTAT CTGTACATTA ATTCTCCTGG CGGCGTAATT
ACTGCGGGGA TGTCCATCTA TGACACCATG CAGTTTATTA AGCCAGACGT CAGCACCATT
TGTATGGGAC AGGCGGCCTC TATGGGGGCG TTTCTGCTGA CTGCCGGGGC GAAAGGCAAA
CGTTTCTGCT TGCCGAACTC TCGCGTCATG ATCCACCAGC CGCTGGGTGG CTACCAGGGC
CAGGCGACGG ATATTGAAAT TCACGCCCGC GAAATTTTGA AAGTAAAAGG GCGCATGAAT
GAACTTATGG CGCATCATAC GGGTCAATCT CTTGAGCAGA TTGAACGTGA TACTGAGCGC
GATCGCTTCC TCTCCGCGCC TGAAGCGGTA GAGTACGGTT TGGTTGACTC AATTTTGACC
CATCGTAATT GA
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| Protein sequence | MNYGDAVPIT EGLADNPSIR LQSVQQVFSI FIQETEMSYS GERDNLAPHM ALVPMVIEQT
SRGERSFDIY SRLLKERVIF LTGQVEDHMA NLIVAQMLFL EAENPEKDIY LYINSPGGVI
TAGMSIYDTM QFIKPDVSTI CMGQAASMGA FLLTAGAKGK RFCLPNSRVM IHQPLGGYQG
QATDIEIHAR EILKVKGRMN ELMAHHTGQS LEQIERDTER DRFLSAPEAV EYGLVDSILT
HRN
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