| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0489 |
|---|
| Symbol | tig |
|---|
| ID | 6872201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 504977 |
|---|
| End bp | 506275 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642783714 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_002214401 |
|---|
| Protein GI | 198245040 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000095414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTT CAGTTGAAAC CACTCAGGGC CTTGGCCGCC GTGTAACGAT TACAATCGCT
GCTGACAGCA TCGAGACCGC TGTAAAAAGC GAGCTGGTCA ACGTAGCGAA AAAAGTACGT
ATTGACGGCT TCCGTAAAGG CAAAGTACCG ATGAATATCG TCGCTCAGCG TTATGGCGCT
TCTGTTCGCC AGGACGTGCT GGGCGATCTG ATGAGCCGCA ACTTCGTTGA CGCGATCATC
AAAGAAAAAA TTAACCCGGC AGGCGCGCCG AACTATGTTC CGGGCGAATA CAAAGTGGGT
GAAGACTTCA CTTACTCCGT CGAGTTTGAA GTCTATCCGG AAGTTGAACT GACCGGCCTC
GAGTCCATCG AAGTTGAAAA ACCGGTTGTT GAAGTCACCG ACGCTGACGT TGATGTGATG
CTGGACACCC TGCGTAAGCA GCAGGCGACC TGGAAAGAAA AAGACGGCGC TGCTGATGCG
GAAGACCGTG TGACCATCGA CTTCACCGGC TCTGTAGACG GCGAAGAGTT CGAAGGCGGC
AAAGCGACCG ATTTCGTTCT GGCTATGGGC CAGGGTCGTA TGATTCCGGG CTTTGAAGAC
GGCGTTAAAG GCCACAAAGC TGGCGAAGAG TTCACTATCG ATGTGACCTT CCCGGAAGAG
TACCATGCTG AAAACCTGAA AGGTAAAGCG GCTAAGTTCG TTATCAACCT GAAGAAAGTT
GAAGAACGCG AACTGCCGGA ACTGACCGAA GAATTCATCA AACGTTTCGG CGTTGAAGAT
GGTTCCGTAG CCGGTCTGCG CGCTGAAGTA CGTAAAAACA TGGAACGCGA GCTGAAAGGC
GCGGTGCGTA ACCGCGTTAA GTCTCAGGCG ATTGAAGGTC TGGTAAAAGC TAACGACATC
GACGTACCGG CTGCGCTGAT CGACAGCGAA ATCGACGTTC TGCGTCGTCA GGCTGCGCAG
CGTTTTGGTG GTAACGAGAA ACAGGCTCTG GAGCTGCCGC GCGAACTGTT CGAAGAACAG
GCTAAGCGTC GTGTAGTTGT CGGTCTGCTG CTCGGCGAAG TCATTCGTAC CAACGAGCTG
AAAGCGGACG AAGAACGCGT TAAAGGCCTG ATCGAAGAGA TGGCGTCTGC TTACGAAGAT
CCGAAAGAAG TAATTGAGTT CTACAGCAAA AATAAAGAGC TGATGGACAA TATGCGTAAC
GTCGCTCTGG AAGAACAGGC TGTTGAAGCG GTTCTGGCAA AAGCGAAAGT GTCTGAAAAA
GCCACTTCCT TCAATGAGCT GATGAACCAG CAGGCGTAA
|
|---|
| Protein sequence | MQVSVETTQG LGRRVTITIA ADSIETAVKS ELVNVAKKVR IDGFRKGKVP MNIVAQRYGA
SVRQDVLGDL MSRNFVDAII KEKINPAGAP NYVPGEYKVG EDFTYSVEFE VYPEVELTGL
ESIEVEKPVV EVTDADVDVM LDTLRKQQAT WKEKDGAADA EDRVTIDFTG SVDGEEFEGG
KATDFVLAMG QGRMIPGFED GVKGHKAGEE FTIDVTFPEE YHAENLKGKA AKFVINLKKV
EERELPELTE EFIKRFGVED GSVAGLRAEV RKNMERELKG AVRNRVKSQA IEGLVKANDI
DVPAALIDSE IDVLRRQAAQ RFGGNEKQAL ELPRELFEEQ AKRRVVVGLL LGEVIRTNEL
KADEERVKGL IEEMASAYED PKEVIEFYSK NKELMDNMRN VALEEQAVEA VLAKAKVSEK
ATSFNELMNQ QA
|
|---|
| |