Gene SeD_A0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0473 
Symbol 
ID6875132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp488645 
End bp489454 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID642783699 
Productphosphonoacetaldehyde hydrolase 
Protein accessionYP_002214386 
Protein GI198244558 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01422] phosphonoacetaldehyde hydrolase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA TTCACGCTGT TATTCTCGAC TGGGCGGGCA CCACCGTCGA TTTTGGCTCC 
TTCGCGCCGA CGCAAATTTT CGTCGAGGCG TTCCGTCAGG CATTTGATGT GGAGATCACC
CTCGCCGAAG CACGCGTGCC AATGGGGCTG GGTAAATGGC AACACATTGA AGCGCTGGGA
AAATTACCTG CTGTTGACGC GCGCTGGCAG GCAAAGTTTG GTCGCTCCAT GAGCGCAGCA
GATATTGATG CCATCTACGC CGCTTTCATG CCGTTACAGA TTGCTAAAGT TGTCGATTTT
TCTTCTCCTA TTGCCGGAGT TATCGACACG ATCGCGGCGC TACGAGCCGA GGGCATCAAG
ATAGGCTCCT GCTCCGGTTA CCCACGAGCG GTGATGGAGC GCCTGGTTCC CGCCGCCGCC
GAGCATGGCT ATCGTCCGGA TCATTGGGTA GCAACGGACG ACCTGGCCGC GGGTGGTCGC
CCGGGGCCGT GGATGGCGCT GCAAAACGTG ATTGCGCTGG GCATTGATGC GGTCGCGCAC
TGCGTGAAGG TAGATGATGC CGCGCCGGGC ATTAGCGAGG GGCTTAACGC GGGGATGTGG
ACGGTGGGGC TGGCGGTATC GGGTAACGAA TTCGGCGCAA CATGGGACGC CTATCAGACA
ATGTCGAAAG AGGACGTTGC GGTCCGCCGC GAGCACGCGG CCAGCAAGCT GTACGCCGCC
GGGGCGCATT ACGTGGTGGA TTCACTGGCG GATTTATCTG GGGTGATTGC GCATATTAAT
GCGCGTCTGG CGCAGGGCGA ACGCCCGTAA
 
Protein sequence
MNRIHAVILD WAGTTVDFGS FAPTQIFVEA FRQAFDVEIT LAEARVPMGL GKWQHIEALG 
KLPAVDARWQ AKFGRSMSAA DIDAIYAAFM PLQIAKVVDF SSPIAGVIDT IAALRAEGIK
IGSCSGYPRA VMERLVPAAA EHGYRPDHWV ATDDLAAGGR PGPWMALQNV IALGIDAVAH
CVKVDDAAPG ISEGLNAGMW TVGLAVSGNE FGATWDAYQT MSKEDVAVRR EHAASKLYAA
GAHYVVDSLA DLSGVIAHIN ARLAQGERP