Gene SeD_A0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0469 
SymbolphnT 
ID6873706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp484347 
End bp485456 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content59% 
IMG OID642783695 
Product2-aminoethylphosphonate ABC transporter ATP-binding component PhnT 
Protein accessionYP_002214382 
Protein GI198242318 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR03258] 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGA AAACGACTGC CGTTCACGTC CCTGCATCGC AGGGGACATC GGGGATAGTC 
CTCGACTCGC TGCGCGTTGC GTATCACGGC AACGTGGTGC TTAAACCGCT CTCTTTGACG
ATTGAACCTG GCGAAGTGCT GGCGCTGATT GGCCCATCAG GATCTGGAAA AACGACGGTG
CTGCGTGCGG TTGCGGGCTT TGTGCAACCT GCAGGCGGTC GTATTCTGAT TGGCGATACG
GACGTCACCC ATCTGCCACC CTATAAACGC GGGTTGGCGA TGGTGGTGCA GAACTACGCC
TTGTTCCCGC ATCTGAAAGT GGAAGACAAC GTCGCTTTTG GCCTGCGTGC GCAGAAGCAG
CCAAAGGCGC TAATTAATGA GCGTGTAACG CAGGCGCTGA AAACGGTTGG CATGAGTGAT
TACGCCGCCC GTTATCCGCA TCAACTTTCC GGCGGCCAGC AGCAACGCGT GGCCATCGCC
CGCGCGATTG CCGTGCGCCC GCGCGTGCTG TTGCTGGATG AACCACTGTC AGCGCTGGAC
GCACAGATTC GTCATAATAT GGTGGAAGAA ATCGCCTGTC TTCACCGTGA GCTGCCGGAG
CTCACTATTC TCTACGTCAC CCACGATCAA ACGGAAGCGC TCACCCTGGC CGATAAAATC
GGCATTATGA AGGATGGCTC GCTGATTGCT CACGGCGAAA CCCGCGCGCT ATATCAGCAT
CCGCCCAATC GTTTTGCCGC CGAATTCTTA GGTCGCGCCA ATATTCTCTC CGCCATCGCG
CTGGGGATAA CGGAGGCTCC GGGGCTGGTG GACGTCAGCT GCGGCGGTGC GGTGATTCGC
GCGTTCAGCC GGGGCAGCCA CCACGGTTAC AACAAACTGC TGTGCATTCG TCCTCAGCAC
CTCAGCCTGA CGCCGCGTTC GGCCTACAGC AACCGCTTCA ACGCCACACT GCAATCGGTG
CACTGGCAGG GCGATTTAAC CCATCTGCTG TGTGACGTTG CTGGCGAAAC GGTGCGAATG
GTGTTGACGC ATGTCAATCC GCTGCCGCGC GTGGGCGACA AGCTGGCGCT GTGGTTCGAA
CCGGATGATG CGGTCCTGAT TGAGGTATAA
 
Protein sequence
MLMKTTAVHV PASQGTSGIV LDSLRVAYHG NVVLKPLSLT IEPGEVLALI GPSGSGKTTV 
LRAVAGFVQP AGGRILIGDT DVTHLPPYKR GLAMVVQNYA LFPHLKVEDN VAFGLRAQKQ
PKALINERVT QALKTVGMSD YAARYPHQLS GGQQQRVAIA RAIAVRPRVL LLDEPLSALD
AQIRHNMVEE IACLHRELPE LTILYVTHDQ TEALTLADKI GIMKDGSLIA HGETRALYQH
PPNRFAAEFL GRANILSAIA LGITEAPGLV DVSCGGAVIR AFSRGSHHGY NKLLCIRPQH
LSLTPRSAYS NRFNATLQSV HWQGDLTHLL CDVAGETVRM VLTHVNPLPR VGDKLALWFE
PDDAVLIEV