Gene SeD_A0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0467 
SymbolphnV 
ID6871730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp482684 
End bp483481 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content56% 
IMG OID642783693 
Product2-aminoethylphosphonate ABC transporter membrane component PhnV 
Protein accessionYP_002214380 
Protein GI198244740 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID[TIGR03255] 2-aminoethylphosphonate ABC transport system, membrane component PhnV 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATTT GGTCACCTAA AGGACGCGCA GCGGCGGGCG TTGTGGCTAG CGTACTGTTT 
ATCGTGTTCT TTTTCCTGCC GCTGGCGGTG ATTCTAATGT CCAGCCTTAG CCAGCAGTGG
AACGGTATTC TGCCGAGTGG CTTCACGCTG AACCACTTTG TTAACGCTCT GCACGGTGCG
GCATGGGATG CCCTACTTGC CAGCCTCACG ATTGGCTTTT GCGCCAGCCT GTTTGCGCTG
CTTTGCGGCG TTTGGGCGGC GCTGGCGCTG CGTCAATATG GGGTGAAAAC GCAGAAATGG
TTAAGTATGG TGTTCTATCT GCCGAGTGCG ATTCCGTCAG TGTCCGTGGG TCTGGGCATT
CTGGTTGCTT TCAGCCAGGT GCCATTGCAA ATGAACGGCA CCCTATGGAT TGTGCTGACA
GCGCACTTTG TGCTGATTTC CGCCTTTACC TTCAGTAACG TGTCGACCGG ACTGGCGCGC
ATTTCCGCCG ATATTGAAAA CGTCGCGTCG AGTCTGGGGG CATCGCCCTG GTATCGTCTG
CGTCACGTGA CGTTGCCGTT ATTGATGCCG TGGATGGTGT CAGCGCTGGC GCTGAGTTTA
TCGCTCTCCA TGGGGGAGTT GGGCGCGACG ATGATGATTT ATCCGCCGGG CTGGACGACG
CTGCCGGTAG CTATCTTTAG CCTGACCGAC CGTGGAAATA TTGCCGACGG CGCGGCGCTG
ACTATTGTGC TGGTGGCCAT TACGCTGCTG CTGATGATGA AGCTGGAGCG CATTGCAAAA
CGGTTGGGGC AGAAATAA
 
Protein sequence
MLIWSPKGRA AAGVVASVLF IVFFFLPLAV ILMSSLSQQW NGILPSGFTL NHFVNALHGA 
AWDALLASLT IGFCASLFAL LCGVWAALAL RQYGVKTQKW LSMVFYLPSA IPSVSVGLGI
LVAFSQVPLQ MNGTLWIVLT AHFVLISAFT FSNVSTGLAR ISADIENVAS SLGASPWYRL
RHVTLPLLMP WMVSALALSL SLSMGELGAT MMIYPPGWTT LPVAIFSLTD RGNIADGAAL
TIVLVAITLL LMMKLERIAK RLGQK