Gene SeD_A0458 details

Gene Information

• Locus tag: SeD_A0458
• Symbol: ribH
• ID: 6873948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 474357
• End bp: 474827
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642783684
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_002214371
• Protein GI: 198244922
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 100
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACATTA TTAAAGCTAA CGTTGCAGCC CCTGACGCTC GTGTCGCCAT CACTATTGCG 
CGTTTCAATC AGTTTATCAA CGACAGCCTG CTGGATGGCG CGGTTGATGC CCTGACGCGT 
ATTGGTCAGG TAAAAGATGA TAATATTACC GTAGTGTGGG TGCCTGGCGC CTATGAACTG 
CCGCTGGCGA CCGAAGCGCT GGCGAAAAGC GGTAAATACG ACGCCGTGGT TGCGCTGGGA 
ACCGTGATTC GCGGGGGGAC TGCGCACTTT GAATATGTGG CAGGCGGCGC CAGCAATGGC 
CTGGCAAGCG TTGCCCAGGA CAGCGGCGTG CCGGTAGCCT TTGGTGTTCT GACCACCGAG 
AGTATTGAAC AAGCCATCGA ACGTGCTGGT ACAAAAGCCG GTAATAAAGG CGCAGAAGCT 
GCGCTGACCG CGCTTGAAAT GATTAATGTA TTGAAAGCCA TTAAGGCCTG A 

 

Protein sequence

MNIIKANVAA PDARVAITIA RFNQFINDSL LDGAVDALTR IGQVKDDNIT VVWVPGAYEL 
PLATEALAKS GKYDAVVALG TVIRGGTAHF EYVAGGASNG LASVAQDSGV PVAFGVLTTE 
SIEQAIERAG TKAGNKGAEA ALTALEMINV LKAIKA