| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0453 |
|---|
| Symbol | |
|---|
| ID | 6873627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 470858 |
|---|
| End bp | 471721 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642783679 |
|---|
| Product | nucleoside-specific channel-forming protein tsx |
|---|
| Protein accession | YP_002214366 |
|---|
| Protein GI | 198241974 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 99 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CTTTACTCGC AGTCAGCGCA GCGCTGGCGC TCACCTCATC TTTTACTGCT
AACGCAGCAG AAAATGATCA GCCGCAGTAT TTGTCCGACT GGTGGCACCA GAGCGTAAAC
GTGGTAGGCA GCTACCATAC CCGTTTCTCG CCGAAATTGA ACAACGACGT CTATCTGGAA
TATGAAGCAT TTGCCAAAAA AGACTGGTTT GATTTCTACG GCTATATCGA TATTCCCAAA
ACCTTTGATT GGGGTAACGG CAACGATAAA GGTATCTGGT CCGACGGTTC TCCGCTGTTC
ATGGAAATCG AACCGCGTTT CTCGATTGAT AAGCTGACCG GCGCAGACCT GAGCTTCGGC
CCGTTTAAAG AGTGGTATTT CGCCAACAAC TACATCTACG ATATGGGCGA TAACAAAGCC
AGCCGCCAGA GCACATGGTA TATGGGTCTG GGGACCGATA TCGACACAGG CCTGCCGATG
GGTCTGTCGC TGAACGTGTA TGCGAAATAT CAGTGGCAAA ACTACGGCGC GTCCAATGAA
AACGAATGGG ACGGCTACCG TTTCAAAGTG AAATACTTCG TCCCCATCAC CGATCTGTGG
GGCGGTAAAC TGAGCTATAT CGGCTTTACC AACTTTGACT GGGGATCTGA TTTAGGCGAC
GATCCGAACC GTACCAGCAA CTCCATCGCT TCCAGCCATA TCCTGGCGCT GAACTACGAT
CACTGGCACT ACTCGGTCGT TGCGCGTTAC TTCCATAACG GCGGACAGTG GCAGAATGGC
GCAAAACTGA ACTGGGGCGA CGGCGATTTC AGCGCGAAAT CTACCGGCTG GGGCGGCTAC
CTGGTCGTGG GTTACAACTT CTAA
|
|---|
| Protein sequence | MKKTLLAVSA ALALTSSFTA NAAENDQPQY LSDWWHQSVN VVGSYHTRFS PKLNNDVYLE
YEAFAKKDWF DFYGYIDIPK TFDWGNGNDK GIWSDGSPLF MEIEPRFSID KLTGADLSFG
PFKEWYFANN YIYDMGDNKA SRQSTWYMGL GTDIDTGLPM GLSLNVYAKY QWQNYGASNE
NEWDGYRFKV KYFVPITDLW GGKLSYIGFT NFDWGSDLGD DPNRTSNSIA SSHILALNYD
HWHYSVVARY FHNGGQWQNG AKLNWGDGDF SAKSTGWGGY LVVGYNF
|
|---|
| |