Gene SeD_A0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0426 
SymbolaroL 
ID6874104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp444170 
End bp444715 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content58% 
IMG OID642783655 
Productshikimate kinase II 
Protein accessionYP_002214342 
Protein GI198244042 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.992434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.531253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAC CTCTTTATCT TGTTGGCCCG CGGGGCTGTG GGAAAACCAC CATCGGTATG 
GCGCTGGCGC AGGCAACCGG TTTTCGGTTT GCAGATACCG ACCGCTGGCT GCAATCGCAC 
GTGCAGATGA GCGTCGCTGA TATCGTTGAA AAAGAAGGCT GGGGAGGGTT CCGCGCCCGG 
GAAACCGCGG CCCTGGAGGC GGTAAGCGCG CCTTCGACTG TCGTGGCGAC GGGAGGCGGT 
ATTATTCTCA CGGATTATAA CCGACGTTAT ATGCACCGTG TTGGCGTAGT GATTTATCTG 
TGCGCGCCGG TATCCACGCT GGTTAATCGG CTTGAGGCTG AACCTGAAGC GGATCTGCGC 
CCGACCCTCA CCGGCAAGCC GTTGAGCGAA GAGGTTCGGG AAGTGCTTGA GCAGCGTGAC 
GCGTTGTATC GCGAAACGGC GCATTACATT ATTGACGCGA CGAAAGCGCC GGCCCAGGTC 
GTTTCTGAAA TTATTGCGGC GCTGCCGCCG TCGACGCAAC GGTTACAGGG AGATGTCTAT 
ACTTAA
 
Protein sequence
MMQPLYLVGP RGCGKTTIGM ALAQATGFRF ADTDRWLQSH VQMSVADIVE KEGWGGFRAR 
ETAALEAVSA PSTVVATGGG IILTDYNRRY MHRVGVVIYL CAPVSTLVNR LEAEPEADLR 
PTLTGKPLSE EVREVLEQRD ALYRETAHYI IDATKAPAQV VSEIIAALPP STQRLQGDVY 
T