Gene SeD_A0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0416 
Symbol 
ID6873472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp438022 
End bp438735 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content55% 
IMG OID642783647 
Productextensin family protein 
Protein accessionYP_002214334 
Protein GI198245099 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.039065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATGG GATGTGAGAA CGGAGGCCGC GTGAGAGGTA AGGGTTTTCT GATTATTGTG 
CTGTTGGGCG GTATTGGCGG GCTGGGATAT CGTTATCTTC CCTCTTATTA TAATCCTTTT 
GCTCCGCTAC AACTTGCCGA TCCGCCAGGC TGGATCACGA CCTTCAAACT ACAGCGCCTG 
ACGCCGTCGC AGTGCCGGGA GCTGTTGACG GCGGCCAATC AACAGGGATT AATTTCATCA 
CAACCTGTTG CGGATAGCGC TGGTGAATGT CCCTTGTCCC ATGTTGTGCG CGTCAGAGAT 
TTTGGCCAGG TCAAACTGAG CAGCAGTTTT TTAGCCTCCT GCCCGTTGGC GCTGCGCTCC 
GCGCTGTTTG TCGAACAGCA GGCAAAACCT TTAACAGAAA CGTGGATGAA GCGCCGCCTG 
ACCCGCATCG AACATCTGGG CAGCTATGCC TGCCGTAATA TTTATCACCG CCCGGATGCG 
CGTCGCAGTG AACATGCCAG CGCAGAAGCG CTGGATGTCA GCGGGTTTCA GCTATCAGAT 
GGCCGAAAAA TCACTGTTCT GCGCGGCTGG GGGCGTCAGG AGACGGGGCC CTGGTTACGC 
GCTATGTTAA ACGCCAGTTG CCATTATTAT GGCAATGGGC TCGGGCCTGA CTATAACGCT 
GCGCATGCTA ACCATTTTCA TCTTGGAATG CGGGGCTACG GCGTGTGTCG TTAA
 
Protein sequence
MFMGCENGGR VRGKGFLIIV LLGGIGGLGY RYLPSYYNPF APLQLADPPG WITTFKLQRL 
TPSQCRELLT AANQQGLISS QPVADSAGEC PLSHVVRVRD FGQVKLSSSF LASCPLALRS 
ALFVEQQAKP LTETWMKRRL TRIEHLGSYA CRNIYHRPDA RRSEHASAEA LDVSGFQLSD 
GRKITVLRGW GRQETGPWLR AMLNASCHYY GNGLGPDYNA AHANHFHLGM RGYGVCR