| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0415 |
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| Symbol | ddl |
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| ID | 6872894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 436850 |
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| End bp | 437944 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642783646 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_002214333 |
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| Protein GI | 198244109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.335332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.0242928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAT TGCGGGTAGG AATAGTATTT GGCGGTAAGT CGGCGGAACA TGAAGTGTCT
TTGCAATCAG CGAAAAATAT CGTTGATGCG ATCGATAAAA CCCGCTTCGA CGTGGTGCTG
TTAGGGATAG ATAAGGCGGG ACAATGGCAT GTTAACGATG CGGAAAATTA TTTGCAGAAT
GCAGACGATC CGGCACATAT CGCGCTACGT CCTTCGGCAA TCAGTCTGGC CCAGGTGCCT
GGCAAACACC AACACCAATT GATTAACGCT CAGAACGGGC AGCCGCTACC AACGGTAGAT
GTTATTTTTC CTATCGTCCA CGGTACGCTG GGCGAAGACG GCTCATTGCA GGGGATGCTG
CGCGTCGCAA ACTTACCGTT TGTCGGTTCA GACGTGCTGA GCTCCGCAGC CTGCATGGAT
AAAGACGTCG CCAAACGACT GCTACGCGAT GCAGGACTGA ATATCGCCCC GTTTATTACA
CTCACCCGAA CGAATCGTCA CGCGTTTAGT TTTGCCGAGG TTGAATCCCG TCTGGGACTG
CCGCTGTTCG TTAAGCCCGC CAATCAGGGC TCTTCGGTCG GCGTCAGTAA AGTCGCTAAC
GAAGCGCAAT ATCAGCAGGC GGTCGCGCTG GCTTTCGAAT TCGATCATAA AGTGGTGGTG
GAACAAGGGA TCAAAGGGCG CGAGATCGAA TGCGCCGTAT TAGGTAACGA TAACCCACAG
GCCAGTACCT GCGGCGAAAT CGTACTGAAT AGCGAATTTT ACGCCTACGA TACTAAGTAT
ATTGATGATA ACGGCGCACA AGTTGTCGTG CCTGCGCAGC TTCCTTCCGG GGTAAATGAC
AAGATCCGCG CGATCGCGAT CCAGGCTTAT CAGACGCTGG GGTGCGCGGG TATGGCGCGT
GTCGATGTCT TCTTAACGGC AGACAATGAG GTCGTGATTA ACGAGATTAA TACGCTGCCA
GGTTTTACCA ATATCAGTAT GTATCCAAAA CTCTGGCAGG CGAGCGGATT GGGCTATACC
GATTTGATTA GTCGCCTGAT TGAGCTGGCG CTGGAACGCC ATACGGCGAA TAACGCCTTA
AAAACCACGA TGTAA
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| Protein sequence | MAKLRVGIVF GGKSAEHEVS LQSAKNIVDA IDKTRFDVVL LGIDKAGQWH VNDAENYLQN
ADDPAHIALR PSAISLAQVP GKHQHQLINA QNGQPLPTVD VIFPIVHGTL GEDGSLQGML
RVANLPFVGS DVLSSAACMD KDVAKRLLRD AGLNIAPFIT LTRTNRHAFS FAEVESRLGL
PLFVKPANQG SSVGVSKVAN EAQYQQAVAL AFEFDHKVVV EQGIKGREIE CAVLGNDNPQ
ASTCGEIVLN SEFYAYDTKY IDDNGAQVVV PAQLPSGVND KIRAIAIQAY QTLGCAGMAR
VDVFLTADNE VVINEINTLP GFTNISMYPK LWQASGLGYT DLISRLIELA LERHTANNAL
KTTM
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