Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0396 |
Symbol | |
ID | 6871613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 418203 |
End bp | 418835 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642783630 |
Product | putative transport protein |
Protein accession | YP_002214317 |
Protein GI | 198241877 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.979225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00000000000454708 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGCCGT TTCATGCCGT TGTGCTTACC GTCAGTCTGT TTGTGTTAAC CTTTTTTAAT CCCGGCGCGA ATCTGTTTGT GGTGGTGCAA ACCAGCCTCG CATCAGGACG CCGGGCGGGA GTCATCACCG GCCTGGGCGT CGCCACGGGA GACGCCTTTT ATTCCGGGCT GGGGCTTTTC GGTCTGGCGA CGCTCATTAC GCAATGCGAA GCGGTATTTT CTCTTATCAA AATTGTCGGC GGCGCCTATT TATTATGGTT CGCCTGGAAC AGTATTCGCC ACCAGGCGAC GCCGCAAATG AGCACGCTCC AGACGCCGAT TGCCGCCCCG TGGACAATTT TCTTTCGCCG GGGATTAATG ACCGATTTAT CCAATCCGCA AACCGTACTG TTTTTTATCA GTATTTTTTC CGTAACGCTT AGCGCAGAAA CGCCCACATG GGCAAGGTTA ATGGCCTGGG CCGGAATTGT GCTGTCATCC GTTATCTGGC GTATTTTTCT CAGCCAGGCC TTTTCGCTCC CCGCAGTCCG CCGCGCTTAT GGGCGTATAC AGCGCATTGC CAGCCGTGTT ATCGGCGCCA TTATCGGGAT GTTTGCGCTC AGACTTCTCT ATGAAGGCGT GACGCACCGC TAG
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Protein sequence | MEPFHAVVLT VSLFVLTFFN PGANLFVVVQ TSLASGRRAG VITGLGVATG DAFYSGLGLF GLATLITQCE AVFSLIKIVG GAYLLWFAWN SIRHQATPQM STLQTPIAAP WTIFFRRGLM TDLSNPQTVL FFISIFSVTL SAETPTWARL MAWAGIVLSS VIWRIFLSQA FSLPAVRRAY GRIQRIASRV IGAIIGMFAL RLLYEGVTHR
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