Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0395 |
Symbol | |
ID | 6875103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 416074 |
End bp | 418164 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642783629 |
Product | ferrichrome-iron receptor |
Protein accession | YP_002214316 |
Protein GI | 198242367 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.458077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000000000000143872 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTGCGA CAACGCGTAT GGCGCTATTG ATAGGCGGAG CTATCGGCGG CGCGACTTTT CCTCTTTCTG CCCAGGAAAC CACAAAAAAT GATACCGTCA TTGTCACCTC GCCCGTTCAG AGTGGCGCGA CCAAGCTGGC GACGCCAGAT ATTGAAACGC CGCAGTCGGT ATCCATTATT ACCCGCCAGC AGTTTGAAGA GCAGGGCGCA ACCAGCGTGC GTCAGGCGGT CAGCTACACC CCAGGCGTAT ACAGTAACCA GATAGGCGCC TCTAACCGCT TTGATTACAT CGTATTGCGT GGTTTTTCGG ACGGTAGTCT GGATAACGTC TATCTCGACG GGTTAAAAAT GATGGGCGAC ACCAATTCGC ACAGTTCGTT GGTGGTTGAC ACCTGGTTTC TGGAAGATAT CGAGGTGGTA CGCGGCCCGG CGTCCGTTCT GTATGGTCGT TCATCGCCAG GCGGCATTGT CGCGTTGACG TCGCGAAAAC CGGCGTTTGA TGCCGGGGGA GAAGTGAAGC TGTTTGCCGG CAATCACAAC CAGCGCGGGG CGGCTTTTGA TGTGACCGGC CCACTGGATG ACAATGAACG TGTGGCGGCG CGTCTTAGCG GTATGACACG TTACGCCGAT TCGCAGTTTA CCCCCTTGAA AGAGGAACGT TATGCGCTGA TGCCGAGCCT GACCTGGCGA ATTACCGATC GGACGCGTCT TGATCTTATG GCCTATCTGC ACCGTGATCC GGAAGGCGGT AGCCACTCCG GACTGCCTTA TCAAGGCACG GTTGTACCTT ATAACGGCAG AAAAATTTCT AACACTTTCT TTGAAGGTGA AGATGACTAC GACAAATACG ATCGCCGTGA AAATATGGTG GGTTATAACA TTGAGCATCT GTTCGATAAC GGCTGGTCGG TACGGCAAAA ATTGCGTTAT TTGCATACCA AAGTGACGTT GAATCAGGTC TATGCCGCAG GTTGGTTGAA TGAAACGGCG CTGAATCGCG GCTATTCCGG CTCTGGGGAG AAAATGTCGG CTATCGCGCT GGATAATCAG CTCGACGGCA GCGTGGATAC CGGGGCGATT AATCATCGTC TGCTGGTGGG GATCGATTAT CAGGATCGCA GTAATCATAC TACTGGCTAT TATGGCGCGT TTCCGCCGAT TGACGCTTTC AACCCTGTTT ATGGCGCTCA GCCGGATTAC ATTACGTTGT ATAGCCGTGA AAAACATAAG CTGCGGCAGA CCGGATACTA TTTACAGGAT CAGATGTCAT GGGATCGCTG GCGCTTTACG TTGGGCGGTC GTTACGATCG GGTCAGCGTG TCTAACATCG ACAAACTTCA TGATTCACGC AGCGATCTCG ATAAAAACAA CGTCAGCACC CGTGCCGCGT TGCTTTATCT GTTCGACAAT GGCGTCGCCC CCTATCTTAG TTATTCTACC GCGTTTACGC CGACCAGCTT CGCCGACGAA AACGGCAATG TGCTGGAACC GATGAAAGGC AAGCAGTGGG AGGCGGGGGT AAAATACGAA CCGCTGGGGG GGAACAGCCA GTTTAGCGCC GCCGTGTATC GTATTAACCA GACCAATATC GCGACCAAAG AAGAACCTAC CGATCCGTAC CGCTCTATTG GTGAAATTGA GTCTAAAGGG GTGGAACTGG AGGCCATTAG CCATTTGTCG GATAGTGTCC GTTTGCAGGC GGCGTATACC TATACTGATA TCCGTTATAA GAAAAGTAGC CCGCAAGAGC AGGGTAAGCG CGCGGTTTAT GCTCCACGGA ACCAGGCCAG CGCCTGGCTA AGCTACGATG TGAAAAGCGG TCTGTTAGAG GGGCTGACTT TGGGCTCCGG CATCCGGTAC GTCAACGGCG TGACCAGCGA TCGCCTGAAT ACCCACACGT TGCCGTCCTA TACACTGGTC GACATGGTGG TTGGGTATGA TTTATCCAGC ATTGGGTTAA ATGGCTTGAG CGCCCAGCTC AACGTAAATA ACCTGACGGA CAAACGCTAT GTCGCTGCTT GTAATTCGCT CTCTTATTGT TATTTTGGCG CCGAGCGTAG CATTGTAGGC AGCGTGTCAT GGGCGTTTTG A
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Protein sequence | MFATTRMALL IGGAIGGATF PLSAQETTKN DTVIVTSPVQ SGATKLATPD IETPQSVSII TRQQFEEQGA TSVRQAVSYT PGVYSNQIGA SNRFDYIVLR GFSDGSLDNV YLDGLKMMGD TNSHSSLVVD TWFLEDIEVV RGPASVLYGR SSPGGIVALT SRKPAFDAGG EVKLFAGNHN QRGAAFDVTG PLDDNERVAA RLSGMTRYAD SQFTPLKEER YALMPSLTWR ITDRTRLDLM AYLHRDPEGG SHSGLPYQGT VVPYNGRKIS NTFFEGEDDY DKYDRRENMV GYNIEHLFDN GWSVRQKLRY LHTKVTLNQV YAAGWLNETA LNRGYSGSGE KMSAIALDNQ LDGSVDTGAI NHRLLVGIDY QDRSNHTTGY YGAFPPIDAF NPVYGAQPDY ITLYSREKHK LRQTGYYLQD QMSWDRWRFT LGGRYDRVSV SNIDKLHDSR SDLDKNNVST RAALLYLFDN GVAPYLSYST AFTPTSFADE NGNVLEPMKG KQWEAGVKYE PLGGNSQFSA AVYRINQTNI ATKEEPTDPY RSIGEIESKG VELEAISHLS DSVRLQAAYT YTDIRYKKSS PQEQGKRAVY APRNQASAWL SYDVKSGLLE GLTLGSGIRY VNGVTSDRLN THTLPSYTLV DMVVGYDLSS IGLNGLSAQL NVNNLTDKRY VAACNSLSYC YFGAERSIVG SVSWAF
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