| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0392 |
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| Symbol | cydB |
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| ID | 6874314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 413559 |
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| End bp | 414569 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642783626 |
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| Product | cytochrome D ubiquinol oxidase, subunit II |
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| Protein accession | YP_002214313 |
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| Protein GI | 198244418 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 7.27607e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATCG ATCTTCCGGT TATCTGGTTT GCTATTATCG TGTTCGCCAC GCTGATGTAT
ATCGTGATGG ATGGTTTCGA TCTGGGCGTC GGTATCCTGT TTCCGTTTAT TCGTGATAAA
CACGATCGCG ATGTTATGGT GAACTCGGTC GCGCCGGTAT GGGACGGGAA CGAAACCTGG
CTGGTGCTGG GCGGGGCCGG GCTTTTTGGC GCGTTCCCGT TGGCTTATGC CGTCATCACC
GACGCGCTGA CTATCCCGCT GGTGGTTATG CTGCTTGGTC TTATCTTTCG CGGCGTCGCG
TTTGAATTCC GTTTTAAAGC CACCGAGTCG CATCGCGCGT TCTGGGATAA ATCCTTTATC
GTCGGGTCAA TCCTGGCGAC CTTTGCCCAG GGAGTTGTGG TGGGCGCGGT GGTGAGCGGT
TTTCAGGTGG AAGGGCGAAC CTTTAGCGGT TCGCAGCTTG ACTGGCTGAC GCCGTTTAAT
CTGTTCTGCG GCGTCGGTCT GGTTGTCACC TACGCGCTGC TGGGCGCTAC CTGGCTGATT
ATGAAAAGCG AAGATCCGCT GCATAGCCGG ATGTGCGCGC TGTCGCGCCC GTTGTTGATC
GTCTTGTTGT TGGTGATGGG AGGCGTCAGC GTGTGGACGC CGCTCACCCA CGACGACATC
GCCGGGCGCT GGTTCACGCT GCCCAATTTA TACTACTTCC TGCCGGTGCC TGTGCTGGTG
TTGGCTTTTA GCGTCTGGCT ATGGCGCAGC GTGAAAAAAC CAGAATCCCA TGCGCGTCCA
TTTATTCTCA CGCTAGGGCT GATTTTTCTG GGGTTCAGCG GGTTAGGCAT CAGTATTTGG
CCGAATATTA TTCCACCGGA TATTTCGCTG TATGCCGCCG CCGCGCCGCC GCAAAGTCAA
AGCTTTATGC TGGTTGGGGC GCTGATAATC ATCCCGATTA TTCTGGCTTA TACCTTCTGG
AGCTACTACG TCTTCCGTGG AAAAGTGCGA CATGGAGAGG GATATCACTG A
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| Protein sequence | MTIDLPVIWF AIIVFATLMY IVMDGFDLGV GILFPFIRDK HDRDVMVNSV APVWDGNETW
LVLGGAGLFG AFPLAYAVIT DALTIPLVVM LLGLIFRGVA FEFRFKATES HRAFWDKSFI
VGSILATFAQ GVVVGAVVSG FQVEGRTFSG SQLDWLTPFN LFCGVGLVVT YALLGATWLI
MKSEDPLHSR MCALSRPLLI VLLLVMGGVS VWTPLTHDDI AGRWFTLPNL YYFLPVPVLV
LAFSVWLWRS VKKPESHARP FILTLGLIFL GFSGLGISIW PNIIPPDISL YAAAAPPQSQ
SFMLVGALII IPIILAYTFW SYYVFRGKVR HGEGYH
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