| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0390 |
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| Symbol | |
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| ID | 6872419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 408695 |
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| End bp | 411664 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642783624 |
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| Product | type III restriction-modification system StyLTI enzyme res |
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| Protein accession | YP_002214311 |
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| Protein GI | 198244599 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.264054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 1.42432e-23 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATTT TACTGGAAGA ACTTCCCCAT CAGGAACAGG CGTTAGCGGC GATTCTGGCG
AGTTTCACCG GTATCGATCA CGCGCAAGCC GATCATAATC ACTATGCTAA TCCGCTGATT
AAGGAACGTT ACGACGATAA GGCCAATATT GACGTTAAAA TGGAGACCGG GACGGGTAAA
ACCTATGTCT ATACCCGGTT GATGTATGAA TTGCATCAGA AGTATGGCCT CTTCAAATTT
GTGCTGGTGG TGCCGACGCC AGCCATTAAA GAAGGCGCGC GGAACTTTAT TACCAGCGAT
TACGCCAGAC AGCATTTTTC ACAGTTCTAC GAAAATACGC GGATGGAACT TTGCACCATC
AACGCCGGTG ATTTTAAAGT AAAGTCGGGG CGTAAAAATT TTCCGGCCCA GCTATTAAGT
TTTACTGATG CCAGCCGTCG TGATAGCCAT ACGATTCAGG TTTTGCTGAT CAATGCGCAA
ATGCTCAATT CCGCCAGTAT GACGCGAGAC GATTACGATC AAACGCTCCT GGGCGGGCTG
ACGTCGCCTG TTAAAGGGCT GCAAATGACG CGACCGGTGG TCATTATTGA TGAACCGCAT
CGTTTTGCGC GAGATAACAA ATTTTATCGA GCGATTCAGG CTATTCAGCC GCAAATGATC
GTCCGCTTTG GCGCTACCTT CCCGGATATT GTCGAAGGTA AGGGTAAAAA TAAATGTGTA
CGTAAAGATT ACTATCGCCG GCAACCGCAG TTTGATCTCA ACGCGGTGGA CAGTTTTAAC
GATGGTTTGG TGAAAGGTAT TGATATTTAT TACCCGAATC TCCCCGAAGA ACAGGCCAAC
AATCGTTATA TCGTTGACAG CGTCACGGCA AAGAAATTAA TCCTCCGACG GGGGAGCAAA
ATTGCCGAGG TTGGCGTGGG CGAAAATCTC GCCGATGTCG ATGCAGGATT TGAAGGCAGT
ATTGAATATG CCGGCAGTAA AATGTTGTCG AACGATCTGG AGCTGGAGGC AGGGATGGCG
CTGGTGCCAG GAACCTTTGG CGCGAGCTAC CAGGAACTGA TTATTCAGGA CGCCATTGAT
AAGCATTTTG ATACCGAGCA GGCAAATTTC TTACGCAGCA ATGAGCCAGA AAATAATGCC
CCGCGTATTA AGACCTTAAG CCTTTTCTTT ATTGACAGTA TTAAAAGCTA TCGTGATGAC
GAAGGTTGGT TGAAACTGAA GTTTGAGTGT TTACTGAAAA AGAAACTGAC GCAACTGATT
GACGATTATC AGCGCAAGAC CCTGCCGCGA GAAGTGGAGT ATCTGTCGTT TCTGCAGGCC
ACGCTCGCCA GCCTGCACTC GGATAACCAA AACGTCCACG CTGGTTACTT TGGCGAAGAC
CGCGGAAGCG GCGATGAGGC GATCCAGGCT GAGGTAGATG ATATTCTGAA AAATAAAGAG
AAGTTGCTCA GTTTTTCAGA CCATCACGGC AACTGGGAAA CGCGCCGCTT TCTGTTTTCA
AAATGGACGC TTCGCGAAGG CTGGGATAAC CCGAATGTTT TTGTCATTGC TAAATTACGT
TCTTCCGGTA GCGAGTCGAG CAAAATTCAG GAAGTGGGGC GCGGCCTGCG GCTACCGGTA
GATGAAAACG GCCATCGCGT TCATCAGGAA GAGTGGCCGT CCCGACTGTC GTTTCTGATT
GGTTATGATG AAAAAGCGTT TGCCAGTATG CTGGTTGATG AGATTAATCG CGACAGCAAA
GTTCAGCTTA ACGAGCAGAA GCTGGATGAG GCGATGATCA CACTCATCGT CACCGAGCGA
CAAAAAGTCG ATCCTGCGTT TACGGAGCTT CGTTTGCTGG AAGATCTGGA TGATAAAAAA
CTGATCAACC GGAGTAATGA GTTTAAACCC AGCGTCACGC TTAACGGGGG AACCAAAAGT
GGCTTTGCGT GGCTACTGGA GTTCTACCCT GAGCTGACGC AGGCGCGGGT GCGAGCGGAT
CGCATTCGTG ACAATAAGCC CGCCTCCCGA CTGCGAGTCA GGTTACGCAA AGAGAATTGG
GAACAACTTA GCAGTATCTG GGAGCAGTTT TCCCGCCGTT ATATGCTGCA ATTCGAGCGT
AGCGGCGCGT CTCTGGAACA GATTGCCGCC GAGGTGCTGC GCGATCCGGC GCTGTATATA
CGCCAGAAGC CAAGCCAGGT TCAACAACGG CTGGTATCGA ATGAAGATAA TGGCCGTTTT
GAAGTGGCGC AGCGGGAAGG CGAATTAGCC GCCAGCGAAT TTATGGCGGG CATGAAATAT
GGCCATTTTC TTAAGCAACT GGCGTTACGC ACCAGTCTGC CGGTTAACGT CCTGCACCCG
GTGTTAATGG CGATGCTGCG TGATGTTTTG CACGGAGATT CACGCTATTT AAGCGAGATC
TCGTTGGACA ATATGACCCG CGCATTACAG ACGCGGATTA ATGCGCATTT TGCGCAGCGC
CACGATTATC TGCCTCTCGA TTTTCAGGCT TCAACGTCGG TATTTGATTC CACGGCACGG
CAGTTCAGAG AGGAGATTAG CGCTGAAATT GTGGGGAAAA ATGTGGATGA GAATGCGATA
GACGATCCTC GTTCTCTCTA TCAAATACCG CCGTTGCGTT ATGACAGCGT CGATCCAGAA
TTGCCGCTAT TAAAATACGA TTATCCGCAA CAGGTTTCTG TGTTTGGCAA ACTGCCTAAG
CGGGCCATTC AGATCCCCAA ATATACGGGG GGCTCTACTA CGCCGGATTT TGTGTACCGT
ATTGAGCGTC AGGACGCCGA CAGCGTTTAT TTACTGGTTG AAACTAAAGC AGAAAATATG
CGCGTAGGCG ATCAGGTTAT TCTTGATGCG CAACGTAAAT TCTTCGATAT GCTGCGTCGG
CAAAATATTA ATGTCGAGTT TGCGGAAGCG ACCAGCGCGC CGGCGGTATT TTCTACCATC
AATGGCTTGA TTGAGGGGAA GGCAAACTAA
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| Protein sequence | MNILLEELPH QEQALAAILA SFTGIDHAQA DHNHYANPLI KERYDDKANI DVKMETGTGK
TYVYTRLMYE LHQKYGLFKF VLVVPTPAIK EGARNFITSD YARQHFSQFY ENTRMELCTI
NAGDFKVKSG RKNFPAQLLS FTDASRRDSH TIQVLLINAQ MLNSASMTRD DYDQTLLGGL
TSPVKGLQMT RPVVIIDEPH RFARDNKFYR AIQAIQPQMI VRFGATFPDI VEGKGKNKCV
RKDYYRRQPQ FDLNAVDSFN DGLVKGIDIY YPNLPEEQAN NRYIVDSVTA KKLILRRGSK
IAEVGVGENL ADVDAGFEGS IEYAGSKMLS NDLELEAGMA LVPGTFGASY QELIIQDAID
KHFDTEQANF LRSNEPENNA PRIKTLSLFF IDSIKSYRDD EGWLKLKFEC LLKKKLTQLI
DDYQRKTLPR EVEYLSFLQA TLASLHSDNQ NVHAGYFGED RGSGDEAIQA EVDDILKNKE
KLLSFSDHHG NWETRRFLFS KWTLREGWDN PNVFVIAKLR SSGSESSKIQ EVGRGLRLPV
DENGHRVHQE EWPSRLSFLI GYDEKAFASM LVDEINRDSK VQLNEQKLDE AMITLIVTER
QKVDPAFTEL RLLEDLDDKK LINRSNEFKP SVTLNGGTKS GFAWLLEFYP ELTQARVRAD
RIRDNKPASR LRVRLRKENW EQLSSIWEQF SRRYMLQFER SGASLEQIAA EVLRDPALYI
RQKPSQVQQR LVSNEDNGRF EVAQREGELA ASEFMAGMKY GHFLKQLALR TSLPVNVLHP
VLMAMLRDVL HGDSRYLSEI SLDNMTRALQ TRINAHFAQR HDYLPLDFQA STSVFDSTAR
QFREEISAEI VGKNVDENAI DDPRSLYQIP PLRYDSVDPE LPLLKYDYPQ QVSVFGKLPK
RAIQIPKYTG GSTTPDFVYR IERQDADSVY LLVETKAENM RVGDQVILDA QRKFFDMLRR
QNINVEFAEA TSAPAVFSTI NGLIEGKAN
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