| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0383 |
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| Symbol | |
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| ID | 6872511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 400450 |
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| End bp | 401676 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642783617 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002214304 |
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| Protein GI | 198242877 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00000000626257 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAGAA CATTCAAAAT TATGTTGATA GCCGGCGTCA TCGCCGCCAG CGGGGGCGTG
ATTTACATGG CCGGCGAAGC ACTATGGGAT AAAGACAACG CCGTCGGACC ACCGGCCAGC
GCGCCGCCTC CACCGTCGGT ACCGGTTGCT AAAGCCCTTA GCCGCACACT CGCGCCTACG
GCGGTATTCA CCGGTTTTCT GGCCGCGCCG GAGACCGTGG AGCTGCGTTC GCGCGTGGGA
GGAACCCTTG ACGCCGTCAG CGTTCCGGAA GGACGTCTGG TAAGCCGCGG ACAACTGCTG
TTCCAGATCG ATCCGCGCCC GTTCGAGGTC GCCCTCGACA CCGCCGTCGC GCAATTACGT
CAGGCTGAAG TACTGGCCCG CCAGGCGCAG GCGGATTTCG ATCGCATTCA ACGACTGGTC
GCCAGCGGCG CCGTATCACG TAAAAACGCT GACGATGTCA CCGCCACGCG TAATGCGCGA
CAGGCGCAGA TGCAATCGGC CAAAGCCGCC GTCGCCGCAG CGCGCCTTGA ACTCTCCTGG
ACCCGTATTA CCGCGCCCAT TGCCGGACGC GTTGACCGCA TACTGGTGAC CCGGGGCAAT
CTGGTCAGCG GCGGCGTAGC GGGTAACGCC ACGCTTCTGA CGACTATCGT GTCTCACAAT
CCCATGTATG TGTATTTCGA TATTGACGAA GCCACCTGGC TGAAGGCGTT ACGACATACC
CGCTCCGACA AAAATCCACC GGTAGTCAAC ATGGGGTTAA CCACCGATAA CGGGCTGCCT
TATCAGGGCG TACTCGACTT TATGGGCAAT CAGATGAACC GCAGCACCGG CACTATCCGG
GCGCGCGCCG TGATTCCTGA CCCCGACGGA ATGCTTTCTC CCGGCCTGTT TGCCCGAATC
AGTTTGCCCA TCGGCGAGCC GCGGGAAACC GTGCTAATTG ACGATCTGGC GGTGAGCGCC
GATCAGGGCA AAAACTATGT GCTGATCGTC GGCAAGGAGA ATCAGGTGGA GTATCGTCCG
GTTGAGCTGG GACAAATGGT CGATGGACTC CGCGTCGTTA CACAGGGAGT ACAGCCGGGA
GAAAAAATCA TCCTCAAGGG GCTGGTGCGT CCTGGCATGA CCGTTGCGCC GCGTCTGGTG
CCGATGCGAC AGAATGTGAC CGACAAACAG ACCGCGACAT TGACTAAAGC GGACGGCGAC
AGTGCGCCGA AGGCGGTGCG CCAATGA
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| Protein sequence | MRRTFKIMLI AGVIAASGGV IYMAGEALWD KDNAVGPPAS APPPPSVPVA KALSRTLAPT
AVFTGFLAAP ETVELRSRVG GTLDAVSVPE GRLVSRGQLL FQIDPRPFEV ALDTAVAQLR
QAEVLARQAQ ADFDRIQRLV ASGAVSRKNA DDVTATRNAR QAQMQSAKAA VAAARLELSW
TRITAPIAGR VDRILVTRGN LVSGGVAGNA TLLTTIVSHN PMYVYFDIDE ATWLKALRHT
RSDKNPPVVN MGLTTDNGLP YQGVLDFMGN QMNRSTGTIR ARAVIPDPDG MLSPGLFARI
SLPIGEPRET VLIDDLAVSA DQGKNYVLIV GKENQVEYRP VELGQMVDGL RVVTQGVQPG
EKIILKGLVR PGMTVAPRLV PMRQNVTDKQ TATLTKADGD SAPKAVRQ
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