Gene SeD_A0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0376 
Symbol 
ID6874593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp392893 
End bp393381 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content39% 
IMG OID642783610 
Productputative inner membrane protein 
Protein accessionYP_002214297 
Protein GI198244584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.658191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0166414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCC ATAAAAGAAC GTTATTAAGC GTGGCGACGC TTGGTATGCT GGCTGTTTCA 
GTCGTACTGA TGGTAGTTTG GGTACGAAAC AGTAACCATA GTTCTATTAA TACTAATGAA 
TTTTTATGTA CGACAAGAAC GGTAACGACG ATACAACCTA AAGATATCCA TGCCGATGGC 
AGTCTTGTTC TTGATTTTAA GATGAAGAGA ATTACGCTTC AATATGAAAT AAAAACAAAA 
GATAACGGTG TAAAAATATT ATACCGGGAC GTGTATATGA AAAATTTACA TCGAACAGCG 
CCTGGTGTTT ATACGTTCGA AGTATCCCAG GTAAAAGTCT TTGCCACGGA CACGGCTGGC 
GATCTGTTAT CATATTTACG GGTTCTGCAT CCGGAAGCGG CTAATGAGAT TCGAATATCT 
AAAGTGGGTG AGAAAACCTT TTTTTATTCT CTTAATCGGC AGCTTTATAA CGTTTGTACC 
GCGCAGTAG
 
Protein sequence
MHFHKRTLLS VATLGMLAVS VVLMVVWVRN SNHSSINTNE FLCTTRTVTT IQPKDIHADG 
SLVLDFKMKR ITLQYEIKTK DNGVKILYRD VYMKNLHRTA PGVYTFEVSQ VKVFATDTAG 
DLLSYLRVLH PEAANEIRIS KVGEKTFFYS LNRQLYNVCT AQ