Gene SeD_A0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0365 
Symbol 
ID6875713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp380053 
End bp381018 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID642783600 
ProductLysR family transcriptional regulator 
Protein accessionYP_002214287 
Protein GI198245418 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.916337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CACCTGTAGG AAAAAAACAT CGCCAGCCCC TTGAGGGCTG GCCTTCTGTT 
GAAGATCTTT TCGTTTTTGT CACCGTTGCT CGCAACGGTG GATTTGCCCG GGCAGCGCTG 
GAGCTGGGGT TATCTCCCTC CTATATCAGC AAACGTATCG CTATCCTTGA AAAATGTCTC 
AACGCCCGGC TTTTTTTTCG AAATAACAGA GTGATGCGTC TCACACCGGA AGGCGAAAAT 
GCGCTGGGTG GGGCTATGCA GGTCGTCAGT GAAATGGATG GCTTTGTCAG TCGTTTGGAT 
AATCAACGTG GTGTGTTGGC TGGTAATATC ACCATCAACT GCTCATTTGG TTTTGGGCAT 
AAATATGTCG CAGAGGCGCT GTCGTCATTT ATGATCGCCT ATCCTGATAT TACGGTAAAA 
CTCACGCTAA CGGATCGTGA AGTGGATCTG GTGGAAGAGG GGATCGATAT TGAAATTCGC 
GTTGGGGATG ATATCAACGA ATTGTATATC GCACGGCAGT TAGCCACTAA TCGACGGATC 
CTGTGTGCTT CCCCTGAATA CCTCGAACGC CACGGCAAGC CAGAGTCTGT TAGTGCGCTT 
GTGCAGCACG ATTGCCTAAT GATTCAGGAA AAAAACTCGG CATTTGGCAA TTGGATATTA 
ACGGACGGTA AGCAGCAGAC ACATTGCCGA CTAAACGGTT TTCATTCTTC CAACAGCGGC 
AGTGTGGTGC TTATTTGGGC CCTGAAAGGC CATGGCATTA CATTGCGGTC GGAATGGGAT 
GTTGCGCAGT ATATTGAACG AGGTGAGCTG GTTTGCGTGT TGCCTCAGTG GTATCAGGAA 
GCGAATATCT GGGCTGTATA TACCCGGCGT TCATCAAGTT CTGATCGTAT CAAAATCTGC 
ATCGATTTCC TCACGGAGCA TCTTGCACAA TGCTTGCCAG GCGGTAAAGC ACCGGGCGTA 
CTGTGA
 
Protein sequence
MKTTPVGKKH RQPLEGWPSV EDLFVFVTVA RNGGFARAAL ELGLSPSYIS KRIAILEKCL 
NARLFFRNNR VMRLTPEGEN ALGGAMQVVS EMDGFVSRLD NQRGVLAGNI TINCSFGFGH 
KYVAEALSSF MIAYPDITVK LTLTDREVDL VEEGIDIEIR VGDDINELYI ARQLATNRRI 
LCASPEYLER HGKPESVSAL VQHDCLMIQE KNSAFGNWIL TDGKQQTHCR LNGFHSSNSG 
SVVLIWALKG HGITLRSEWD VAQYIERGEL VCVLPQWYQE ANIWAVYTRR SSSSDRIKIC 
IDFLTEHLAQ CLPGGKAPGV L