Gene SeD_A0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0364 
Symbol 
ID6873921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp379105 
End bp380019 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID642783599 
Producthaloacetate dehalogenase H-1 
Protein accessionYP_002214286 
Protein GI198246223 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAC TGATTGAATG CGGCGCCTCT CCGTTTATTC CGGGTTTTGC GCTCAAGGAT 
GTTCGTCTGG AAAATGGTCT GACGGTAAGA GTGGCTATCG GAGGCAGCGG TTCACCTTTG
GTACTGCTAC ATGGGCATCC GCAGAATCAT ACAACATGGC GGAAAGTCGC ACCGACATTG
GCGCAAAATC ATACAGTCAT TTTGCCGGAT TTGCGTGGCT ATGGCGACAG CGATAAACCA
ACGAGCGATC CGGCGCACCG TACCTATTCA AAGCGCACCA TGGCGCAGGA TATCGTCATG
TTAATGGATG CGCTCGGCTT TTCCCGTTTT GCCTTCGTAG GGCATGATCG TGGCGGACGC
GTAGGACACA GGCTCGCGCT GGATTATCCG GATCGTGTGA CCTGTTGTAC TTTTATCGAC
ATTGCTCCAA CCGCGACGAT GTACGCCTTG ACCGATAAAT CCTTTGCTAC GCGTTACTTT
TGGTGGTTTT TCCTGATTCA ACCTTTCCCG TTACCCGAAA CGATGATTGC GCACGATCCG
GCATTTTTTC TGCGTAAGCA TATTTCTGGC CAGCTAAAAA TAGAGGGCGC GACCTCGCAG
GAAGCATTCA ATGAATACCT GCGCTGTTAC CAGAACCCTG AGATGATCCA CGCGATCTGT
GAGGACTACC GGGCTGCTGC GACGATTGAT TTGGACGATG ATGCCGCAGA TACGTCGGCG
CGTATCCGGT GTCCGTTACA GTTGCTGTGG GGAGGGCTGG GAACGGTAGG GCAACTATAT
GATGTGGTTG GTACCTGGAA AGAAAAGGCG CTAAACGTTC AGGGGGAAGC ATTGCCTTGC
GGACACTCCC CGCAGGAAGA GTGTCCTGAG TACTTTATCC AGAAACTTCA GTCCTTTTTA
CATTCAGTGT TATAA
 
Protein sequence
MSTLIECGAS PFIPGFALKD VRLENGLTVR VAIGGSGSPL VLLHGHPQNH TTWRKVAPTL 
AQNHTVILPD LRGYGDSDKP TSDPAHRTYS KRTMAQDIVM LMDALGFSRF AFVGHDRGGR
VGHRLALDYP DRVTCCTFID IAPTATMYAL TDKSFATRYF WWFFLIQPFP LPETMIAHDP
AFFLRKHISG QLKIEGATSQ EAFNEYLRCY QNPEMIHAIC EDYRAAATID LDDDAADTSA
RIRCPLQLLW GGLGTVGQLY DVVGTWKEKA LNVQGEALPC GHSPQEECPE YFIQKLQSFL
HSVL