Gene SeD_A0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0348 
SymbolfrsA 
ID6874782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp366796 
End bp368040 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content55% 
IMG OID642783585 
Productfermentation/respiration switch protein 
Protein accessionYP_002214273 
Protein GI198242674 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG CTAACCTCAG CGAAACCCTG TTCAAACCCC GCTTTAAACA TACTGAAACG 
TCTACCCTTG TCCGTCGGTT CAATCGTGGG TCGCAGCCGC CCATGCAATC CGCGCTGGAC
GGTAAGAACG TCCCGCACTG GTATCGCATG ATAAACCGCC TGATGTGGAT TTGGCGCGGC
ATTGACCCAC GAGAAATCCT TGATGTGCAG GCGCGTATTG TGATGAGCGA CGCAGAGCGA
ACGGATGATG ATTTATACGA TACGGTCATC GGTTACCGCG GCGGCAACTG GATTTATGAG
TGGGCAAAGC AGGCGATGGA CTGGCAGCAG AAAGCCTGTC AGGAACAGGA CGCCATGCGC
AGCGGACGCT ACTGGCTTCA TGCCTCAACG CTCTATAACA TTGCCGCCTA CCCGCATTTG
AAGGGCGATG AGCTGGCGGA GCAGGCGCAG GCGCTGGCGA ATCGCGCCTA TGAAGAGGCC
GCGCAGCGGT TGCCAGGCTC GTTACGTGAA ATGGAATTTG CCGTTCCTGG CGGTTCGCCT
GTCACCGCGT TTTTACATAT GCCGAAAGGG GATGGCCCGT TTCCGACGGT GCTCATGTGC
GGCGGCCTGG ACGCCATGCA AACCGACTAT TACACCCTGT ATGAACGCTA TTTCGCGCCG
CGCGGTATCG CGATGTTAAC GCTTGATATG CCTTCGGTTG GATTTTCATC AAAGTGGAAA
TTAACCCAGG ATTCCAGCTT GCTCCACCAG CATGTGTTAA AAGCGCTTCC TAATGTTCCC
TGGGTGGATC ATACCCGTGT TGCGGCGTTT GGTTTCCGTT TTGGCGCCAA TGTTGCGGTG
CGTCTGGCCT ATCTGGAAGC GCCGCGTTTG AAGGCGGTGG CTTGCCTGGG GCCGGTGGTC
CATGCGCTAC TTAGCGATCC GCAACGACAG AGCACGGTGC CGGAGATGTA TCTGGATGTG
CTGGCCAGCC GTCTGGGTAT GCATGATGCT TCGGATGAGG CGCTGCGTGT GGAGCTCAAT
CGCTATTCGT TGAAAGTACA GGGGCTACTG GGCAGACGTT GTCCTACGCC AATGCTTTCC
GGCTTCTGGA AAAACGATCC TTTCAGCCCG GAAGAAGAGT CTCGCTTAAT TACAACATCA
TCTTCAGACG GTAAGCTGAT AGAGATCCCT TTTAACCCGG TGTACCGCAA TTTTGACCGC
GCGCTGCAAG AAATTACCGA CTGGATTAAT CATAGATTGT GTTAA
 
Protein sequence
MTQANLSETL FKPRFKHTET STLVRRFNRG SQPPMQSALD GKNVPHWYRM INRLMWIWRG 
IDPREILDVQ ARIVMSDAER TDDDLYDTVI GYRGGNWIYE WAKQAMDWQQ KACQEQDAMR
SGRYWLHAST LYNIAAYPHL KGDELAEQAQ ALANRAYEEA AQRLPGSLRE MEFAVPGGSP
VTAFLHMPKG DGPFPTVLMC GGLDAMQTDY YTLYERYFAP RGIAMLTLDM PSVGFSSKWK
LTQDSSLLHQ HVLKALPNVP WVDHTRVAAF GFRFGANVAV RLAYLEAPRL KAVACLGPVV
HALLSDPQRQ STVPEMYLDV LASRLGMHDA SDEALRVELN RYSLKVQGLL GRRCPTPMLS
GFWKNDPFSP EEESRLITTS SSDGKLIEIP FNPVYRNFDR ALQEITDWIN HRLC