Gene SeD_A0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0343 
Symbol 
ID6873863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp361364 
End bp362419 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content52% 
IMG OID642783580 
ProductDNA polymerase IV 
Protein accessionYP_002214268 
Protein GI198245459 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.663031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAA TCATACATGT TGATATGGAC TGTTTTTTTG CCGCGGTAGA GATGCGTGAT 
AATCCGGCGT TACGCGATAT CCCCATTGCC ATTGGCGGGA GTCGTGAGCG AAGAGGCGTT
ATCAGTACCG CCAACTATCC TGCGCGCCAG TTTGGCGTAC GTAGCGCGAT GCCGACCGCC
ATGGCGCTAA AGCTGTGCCC CCATCTCACC TTACTGCCTG GCCGCTTTGA CGCCTATAAA
GAGGCTTCGC GGCATGTACG TGACATCTTT TCCCGCTACA CTTCACTGAT TGAACCGCTC
TCGCTGGATG AAGCCTGGCT GGATGTGACT GACAGCCCGC ACTGTTATGG TTCGGCGACG
CTGATCGCCA GGGAGATTCG TCAGACTATT TTCAATGAAC TGCAACTCAC CGCCTCCGCC
GGCGTTGCGC CAGTGAAATT TCTGGCGAAG ATCGCCTCCG ATCTCAATAA ACCGAACGGA
CAATATGTTA TTACGCCAGC CGATGTACCC GGCTTTCTTA AAACGTTGCC GTTAGCCAAA
ATTCCAGGCG TGGGGAAAGT TTCCGCCGCT AAACTGGAAA ATATGGGGTT AAGAACCTGC
GGGGATATTC AACAGTGCGA TCTGGCGATG CTTCTCAAAC GCTTTGGTAA ATTTGGCCGG
GTATTATGGG AGCGTAGTCA GGGTATTGAC GAGCGTGATG TTAACAGCGA AAGGCTGCGT
AAATCGGTAG GCGTTGAGCG TACTCTGGCG GAGGATATTC ATGAATGGTC GGACTGCGAG
GCCATTATTG AACATTTATA TCCGGAACTG GAGCGTCGTC TGGCTATAGT AAAGCCCGAT
TTACTGATTG CCCGACAGGG CGTTAAATTA AAATTTAATG ATTTTCAGCA AACCACTCAG
GAACATGTCT GGCCGCAATT AAATAAAGAA GACTTAATTA CCACCGCCCG TAAAACCTGG
GACGAGCGTC GCGGCGAGCG CGGCGTACGG CTGGTGGGGC TACACGTAAC GCTGCTCGAC
CCTCAGTTGG AACGACAGTT GGTGTTAGGG TTATAA
 
Protein sequence
MRKIIHVDMD CFFAAVEMRD NPALRDIPIA IGGSRERRGV ISTANYPARQ FGVRSAMPTA 
MALKLCPHLT LLPGRFDAYK EASRHVRDIF SRYTSLIEPL SLDEAWLDVT DSPHCYGSAT
LIAREIRQTI FNELQLTASA GVAPVKFLAK IASDLNKPNG QYVITPADVP GFLKTLPLAK
IPGVGKVSAA KLENMGLRTC GDIQQCDLAM LLKRFGKFGR VLWERSQGID ERDVNSERLR
KSVGVERTLA EDIHEWSDCE AIIEHLYPEL ERRLAIVKPD LLIARQGVKL KFNDFQQTTQ
EHVWPQLNKE DLITTARKTW DERRGERGVR LVGLHVTLLD PQLERQLVLG L