Gene SeD_A0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0342 
Symbol 
ID6873210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp360374 
End bp361114 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content48% 
IMG OID642783579 
Producthypothetical protein 
Protein accessionYP_002214267 
Protein GI198244473 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.360607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAA TCGCATTTTT TCTTGCGATG CTTCTGATGC CGTGCGTCTC GTTTGCCGGT 
TTGCTGAGCA GCAGCAGCCC CGTCACGCCG GTCAGTAAAG AGTATAAGCA GCAGTTAATG 
GGCTCACCGG TCTATATTCA GATTTTTAAA GAAGAGCGCA CCCTTGATCT CTACGTCAAA 
ATGGGTGAGC AATACCAGTT GCTTGATAGC TACAAAATTT GCAACTATTC CGGCGGGTTA 
GGCCCGAAAC GCCGTCAGGG CGATTTTAAA AGTCCGGAAG GTTTTTACAG CGTTCAGCGT 
AATCAACTCA AGCCAGACAG CCGTTTTTAT AAGGCCATCA ACATTGGTTT TCCAAATGCC 
TACGATCGTG CGCATGGCTA TGATGGTAAA TATCTGATGA TTCACGGCGC CTGTGTTTCC 
GTCGGCTGCT ATGCCATGAC CGATAGCGGC ATTGATGAGA TTTTCCAGTT TGTCACCGCC 
GCGCTGGTCT TTGGTCAGCC GAGCGTGCAG GTGAGTATTT ATCCGTTCCG GATGACCGAC 
GCTAATATGC AGCGTCATAA ATATTCATAT TACAAAGATT TCTGGGCGCA GCTAAAACCC 
GGCTACGATT ATTTTGAACA GACGCATAAG CCGCCAACTG TTTCTATCGT TGATGGACGT 
TACGTCGTGA GCAAACCGTT GAGTCACGAA GTCGTTCAGC CACAGCTGGC CTCAAATTAT 
ACGCTCTCCG AGGCAAAATA A
 
Protein sequence
MRKIAFFLAM LLMPCVSFAG LLSSSSPVTP VSKEYKQQLM GSPVYIQIFK EERTLDLYVK 
MGEQYQLLDS YKICNYSGGL GPKRRQGDFK SPEGFYSVQR NQLKPDSRFY KAINIGFPNA 
YDRAHGYDGK YLMIHGACVS VGCYAMTDSG IDEIFQFVTA ALVFGQPSVQ VSIYPFRMTD 
ANMQRHKYSY YKDFWAQLKP GYDYFEQTHK PPTVSIVDGR YVVSKPLSHE VVQPQLASNY 
TLSEAK