Gene SeD_A0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0338 
Symbol 
ID6875342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp355285 
End bp356052 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content54% 
IMG OID642783576 
Producthypothetical protein 
Protein accessionYP_002214264 
Protein GI198245233 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.225628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.358531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGGTT TGAAAATTAC TCTGTTGCAA CAACCTTTAG TCTGGATGGA CGGCCCGGCA 
AACCTGCGTC ATTTTGACAG ACAGCTAGAG CTCGTATCTG GCCGGGATGT GATTGTTCTG 
CCTGAAATGT TTACCACCGG CTTCGCGATG GAGGCCGCTA ATAACTCACT TTCGCAAGAT 
AGCGTGATTA CGTGGATGCA GGCCAAAGCC CGACAAACTG ACGCTCTGAT TGCCGGCAGC 
GCGGCGCTAC AAACTGAGCG CGGCGCCGTA AATCGCTTCT TACTGGTTGA ACCGGAAGGC 
AAGGTTCATC TCTATGATAA GCGCCATCTC TTTCGTATGG CGGATGAACA TCAACATTAT 
GCCGCAGGCG ATAAACGCAT CATCGTGCAG TGGCGCGGTT GGCGCATTCT GCCGCTGATC 
TGTTACGATC TGCGCTTTCC GATATGGTCA CGCAACCGCA ATGATTACGA TCTGGCGCTG 
TATGTAGCGA ACTGGCCCGC GCCGCGCTCG CTACACTGGC AAACATTACT GACGGCGCGC 
GCTATTGAAA ATCAGGCTTA TGTCGCAGGC TGCAACCGGG TTGGCACCGA TGGTAACGGG 
CTACATTATC GCGGCGATAG CCGGATCATT AATCCCCAGG GCGACATTAT CGCCACCGCC 
GAACCACACC AGGCGACACG TATCGATGCC GATCTTTCTC TCGTCGCCTT GCAGGACTAT 
CGCGAAAAAT TTCCAGCCTG GCGCGATGCC GATCCATTCA CCTTGTAA
 
Protein sequence
MSGLKITLLQ QPLVWMDGPA NLRHFDRQLE LVSGRDVIVL PEMFTTGFAM EAANNSLSQD 
SVITWMQAKA RQTDALIAGS AALQTERGAV NRFLLVEPEG KVHLYDKRHL FRMADEHQHY 
AAGDKRIIVQ WRGWRILPLI CYDLRFPIWS RNRNDYDLAL YVANWPAPRS LHWQTLLTAR 
AIENQAYVAG CNRVGTDGNG LHYRGDSRII NPQGDIIATA EPHQATRIDA DLSLVALQDY 
REKFPAWRDA DPFTL