Gene SeD_A0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0335 
Symbol 
ID6871114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp353518 
End bp354237 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content43% 
IMG OID642783573 
Producthypothetical protein 
Protein accessionYP_002214261 
Protein GI198244187 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.294992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.308689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TTTTCGCAGT CTGCATCATT CCCCTTGTGG TAGCCTGGTC CGCTACTGCA 
TCAGCAAAAG AAGGGATCTA TATCACCGGG AAAGCGGGGA CATCCGTAGT CAATGTCTAT
GGAATCAACT CAACCTTCAG CCAGGATGAG ATAGTTAATG GTCATGCAAC GTTACCTGAC
CGTACCAAAG GCGTTTTTGG CGGCGGGGTT GCTATCGGTT ATGACTTTTA TGATCCATTC
CAGCTTCCAG TACGTTTAGA ACTGGATACC ACTTTCAGAG GTGAGACGGA TGCTAAAGGC
GGGCAGGATA TTATTGCATT TGGTGATCCA GTACACATAA ATGTAAAAAA TCAGGTCCGA
ATGACCACTT ACATGGTTAA TGGCTATTAT GATTTTCACA ATAGTACGGC ATTTACTCCC
TATATCAGCG CAGGCGTTGG CCTCGCTCAT GTGAAGCTAA GTAATAACAC CATTCCTGTT
GGTTTTGGTA TTAATGAAAC TCTGTCTGCT TCAAAAAATA ACTTTGCCTG GGGCGCAGGT
ATCGGTGCAA AATATGCTGT AACAGATAAT ATTATGATTG ACGCCAGTTA TAAATACATT
AATGCTGGCA AAGTAAGCAT TTCAAAAAAT CACTATGCTG GTGATGAACA TACCGCTTAT
GATGCAGACA CAAAGGCTGC CTCCAATGAC TTCATGCTCG GCATTACTTA CGCCTTTTAA
 
Protein sequence
MKNFFAVCII PLVVAWSATA SAKEGIYITG KAGTSVVNVY GINSTFSQDE IVNGHATLPD 
RTKGVFGGGV AIGYDFYDPF QLPVRLELDT TFRGETDAKG GQDIIAFGDP VHINVKNQVR
MTTYMVNGYY DFHNSTAFTP YISAGVGLAH VKLSNNTIPV GFGINETLSA SKNNFAWGAG
IGAKYAVTDN IMIDASYKYI NAGKVSISKN HYAGDEHTAY DADTKAASND FMLGITYAF