| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0293 |
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| Symbol | |
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| ID | 6871117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 309903 |
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| End bp | 310727 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642783536 |
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| Product | SciE protein |
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| Protein accession | YP_002214224 |
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| Protein GI | 198242047 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.816472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CTGACACGCT TCCTGCTACC CTGTCCGCGC TGCTACAGGA ATACTCTATT
GCGGAGGGGA TTCAGATGGC GGAGCAGCAG GTTCGGGAAA ATCCGGCGAA GGCGCTCTGC
CGCCACAGCC TGTTTCAGTT GCTGTGTGTG GCCGGAGACT GGTCGCGGGC GCTACACCAG
CTTCAGCTAT GTGCCAGGAT GGAGGCCAAT TATACCCAGG AGGCCCGGCT GTACCGGGAG
CTGGTTCGCT GCGAAATGTT CCGCCACACC GTTTTTCAGG GTGAACAACG ACCCGGTTTT
CTTCTGCCGC AGCCCGTTTG GGTGGAGTCA CTGCTGGCGG CACTCGCCTG TCATGACGAT
ACCGGTGAGG TTGATAAACA CCGTAATACC GCACTGGAAG CCATAACAGA CACGGGCGGG
CAGTGGAACG GCGGCGCATT TGACTGGGCG AGCGACAGCG ATTCCCGCCT TGGCCCGGTA
CTTGAGCTAG TCACCGGCGG CGTGTATATC TGGCTGCCGT TTTCGCAAAT ACGCTCGCTG
GAATCGCCGC AACCGACGCG CCTGACCGAT CTGCTGTGGA AACCCGTTAA TATCACCCTG
GTGAATGGCG ATACGCACGG CGCCTGGCTC TTTACCCGTT ACAGCGGTTC GGAAAGTGCA
TCCGACGCCC TGCGTCTGTG CCGGGAAACC GCCTGGCAGG ACGGCCCCGG CGAAACCACC
GTGCGAGCGC TGGGGCAGAA AGTGTGGCTG ACCAGCCACG GCGATATCAG CCTGCTGGAC
ATGGCCCATT GTACCTTTCA TGCTCAGGAA AACGATGGCG CATGA
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| Protein sequence | MKKTDTLPAT LSALLQEYSI AEGIQMAEQQ VRENPAKALC RHSLFQLLCV AGDWSRALHQ
LQLCARMEAN YTQEARLYRE LVRCEMFRHT VFQGEQRPGF LLPQPVWVES LLAALACHDD
TGEVDKHRNT ALEAITDTGG QWNGGAFDWA SDSDSRLGPV LELVTGGVYI WLPFSQIRSL
ESPQPTRLTD LLWKPVNITL VNGDTHGAWL FTRYSGSESA SDALRLCRET AWQDGPGETT
VRALGQKVWL TSHGDISLLD MAHCTFHAQE NDGA
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