Gene SeD_A0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0279 
Symbol 
ID6873116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp296729 
End bp297643 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content51% 
IMG OID642783523 
ProductLysR substrate binding domain-containing protein 
Protein accessionYP_002214212 
Protein GI198242091 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA CCTCCGAAGA ACTCGCAATT TTTGTCGCTG TCGTGGAAAG CGGCAGCTTC 
AGCCGGGCGG CAGAGCAGCT TGGACAGGCC AATTCCGCTG TCAGCCGGGC AGTTAAAAAG 
CTGGAGATGA AGCTCGGCGT CAGTCTGCTT AATCGTACGA CCCGACAGCT GAGCCTGACT 
GAAGAAGGAG AGCGATACTT CAGGCGCGTG CAGCAGATAC TGCAAGAAAT GGCCGCCGCA 
GAAACGGAAA TCATGGAGTC GCGTAATACC CCGCGCGGCT TACTGCGTAT CGATGCGGCA 
ACGCCGGTAA TGCTGCATTT CCTGATGCCG CTGATTAAAC CTTTTCGTGA ACGGTATCCG 
GAAATAACGT TGTCTCTTGT CTCCTCAGAA ACGTTCATCA ATCTTATTGA ACGAAAAGTG 
GATGTTGCGA TACGCGCAGG CACGTTGACA GATTCAAGTC TGCGCGCGCG TCCGTTATTT 
ACCAGCTATC GTAAGATTAT CGCCTCACCG GATTATATTG CCCGTTTTGG CAAGCCTGAG 
AGCGTTGAAG AGTTAAAACA GCATCTGTGC CTGGGGTTCT CAGAACCCAT CTCGCTCAAT 
ACCTGGCCGA TAGCCTGTAG TGACGGACAG CTCCATGAGA TCGAATGTGG GATTTCGTCC 
AACAGCGGGG AAACGTTAAA ACAACTTTGC CTGAGCGGTA ACGGCATTGC ATGTCTTTCA 
GATTATATGA TTGATAAAGA GATCGCCCGG GGAGAACTGG TGGAACTGCT GGCCGATAAA 
CGTCTGCCGG TAGAAATGCC TTTCAGCGCC GTTTACTACA GCGATCGCGC CGTCAGCACA 
CGTATTCGGG CATTTATCGA CTTTTTGAGC GAATATATAA GAACAGCTCC CGCAGGAGCT 
GTGAAAGAGG GGTAA
 
Protein sequence
MKATSEELAI FVAVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT 
EEGERYFRRV QQILQEMAAA ETEIMESRNT PRGLLRIDAA TPVMLHFLMP LIKPFRERYP 
EITLSLVSSE TFINLIERKV DVAIRAGTLT DSSLRARPLF TSYRKIIASP DYIARFGKPE 
SVEELKQHLC LGFSEPISLN TWPIACSDGQ LHEIECGISS NSGETLKQLC LSGNGIACLS 
DYMIDKEIAR GELVELLADK RLPVEMPFSA VYYSDRAVST RIRAFIDFLS EYIRTAPAGA 
VKEG