Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0278 |
Symbol | dkgB |
ID | 6875836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 295905 |
End bp | 296708 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642783522 |
Product | 2,5-diketo-D-gluconate reductase B |
Protein accession | YP_002214211 |
Protein GI | 198243773 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTATCC CTGCATTCGG TTTAGGTACT TTTCGCCTGA AAGACGACGT GGTTATCGCT TCTGTGAAAA CGGCGCTTGA ACTGGGCTAC CGTGCTGTCG ACACTGCGCA AATCTATGAT AATGAAGCGG CTGTTGGACA GGCGATTGCT GAGAGCGGCG TACCGCGTAA TGAGCTGTAC ATCACCACCA AGATCTGGAT TGAAAACCTT AGCAAAGACA AGCTAATCCC AAGCCTGAAA GAGAGCCTGA AAAAACTGCG TACCGATTAT GTCGATCTGA CGCTGATCCA CTGGCCATCT CCGGGTGATG CCGTGTCTGT CGAAGAATTT ATGCAGGCAT TGCTGGAAGC TAAAAAACAA GGCCTGACTC GCGAAATTGG CATTTCAAAC TTCACCATTC CGTTGATGGA AAAGGCTATT GCCGCGGTGG GCGCAGACCA TATAGCCACC AACCAGATTG AGCTATCTCC GTATCTGCAG AATCGTAAGG TGGTTGACTG GGCGAAAGCG CACGGTATCC ACATCACCTC TTACATGACG CTGGCATACG GTAAAGCGCT GAAAGATGAA GTGATTGCGC GCATTGCGGC TAAACATAAT GCGACCCCGG CGCAGGTTAT TCTGGCATGG GCAATGGGTG AAGGTTACTC CGTGATCCCT TCATCCACCA GGCGTGAAAA TCTGGCAAGC AACCTGCTGG CGCAGGATCT GCATCTGGAT GCCGAAGATA AAAATGCGAT CGCGGCACTG GATTGCAACG ATCGTCTGGT TAGCCCGGAA GGACTGGCTC CTGCCAGGGA TTAA
|
Protein sequence | MTIPAFGLGT FRLKDDVVIA SVKTALELGY RAVDTAQIYD NEAAVGQAIA ESGVPRNELY ITTKIWIENL SKDKLIPSLK ESLKKLRTDY VDLTLIHWPS PGDAVSVEEF MQALLEAKKQ GLTREIGISN FTIPLMEKAI AAVGADHIAT NQIELSPYLQ NRKVVDWAKA HGIHITSYMT LAYGKALKDE VIARIAAKHN ATPAQVILAW AMGEGYSVIP SSTRRENLAS NLLAQDLHLD AEDKNAIAAL DCNDRLVSPE GLAPARD
|
| |