Gene SeD_A0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0248 
SymbollpxD 
ID6871882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp266244 
End bp267269 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content52% 
IMG OID642783493 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_002214187 
Protein GI198245250 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.2961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.470631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAA TTCGACTGGC TGACTTAGCA GAACAGTTGG ATGCAGAATT ACACGGTGAT 
GGCGATATCG TCATCACCGG CGTTGCGTCC ATGCAATCTG CAACAACAGG CCACATTACG 
TTTATGGTAA ATCCTAAGTA CCGTGAACAC TTAGGTTTAT GCCAGGCTTC TGCGGTTGTC 
ATGACGCAGG ACGATCTTCC TTTTGCTAAG AGCGCGGCGC TGGTAGTTAA AAATCCCTAC 
CTGACCTACG CGCGCATGGC GCAAATTTTA GATACTACGC CGCAGCCCGC GCAGAATATC 
GCGCCAAGCG CCGTGATTGA TGCGACGGCA ACGCTGGGTA GCAATGTTTC AGTCGGCGCG 
AATGCGGTGA TTGAATCTGG CGTACAACTG GGCGATAACG TGGTTATCGG CGCAGGCTGT 
TTCGTCGGAA AAAATAGCAA AATCGGGGCG GGTTCACGCT TGTGGGCGAA CGTAACGATT 
TACCACGACA TTCAGATCGG TGAGAATTGC CTGATCCAGT CCAGTACGGT GATCGGCGCG 
GACGGTTTTG GCTACGCTAA CGATCGTGGC AACTGGGTGA AGATCCCACA ACTGGGCCGG 
GTCATTATTG GCGATCGTGT CGAGATCGGC GCTTGTACCA CCATTGACCG TGGCGCGTTG 
GATGATACTG TTATTGGCAA TGGCGTGATT ATTGATAATC AGTGCCAGAT TGCACATAAC 
GTCGTGATTG GCGACAATAC GGCAGTTGCC GGTGGCGTCA TTATGGCGGG TAGCCTGAAG 
ATTGGCCGTT ACTGCATGAT TGGCGGCGCC AGCGTGATCA ATGGGCATAT GGAAATATGC 
GACAAAGTCA CGGTAACTGG CATGGGTATG GTGATGCGTC CCATCACGGA ACCGGGCGTC 
TACTCCTCAG GCATTCCGCT GCAACCCAAC AAAGTATGGC GTAAAACTGC TGCACTGGTG 
ATGAACATTG ATGATATGAG CAAGCGTCTC AAAGCGATTG AGCGCAAGGT TAATCAACAA 
GACTAA
 
Protein sequence
MPSIRLADLA EQLDAELHGD GDIVITGVAS MQSATTGHIT FMVNPKYREH LGLCQASAVV 
MTQDDLPFAK SAALVVKNPY LTYARMAQIL DTTPQPAQNI APSAVIDATA TLGSNVSVGA 
NAVIESGVQL GDNVVIGAGC FVGKNSKIGA GSRLWANVTI YHDIQIGENC LIQSSTVIGA 
DGFGYANDRG NWVKIPQLGR VIIGDRVEIG ACTTIDRGAL DDTVIGNGVI IDNQCQIAHN 
VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV 
YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KAIERKVNQQ D